(7 nodes) Eukaryotic Translation Termination network (Poecilia reticulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	trmt112	tRNA methyltransferase subunit 11-2. (123 aa)
	etf1	Eukaryotic translation termination factor 1b. (437 aa)
	apeh	Zgc:136971. (711 aa)
	n6amt1	N-6 adenine-specific DNA methyltransferase 1. (218 aa)
	LOC103468154	G1 to S phase transition 1, like. (639 aa)
	gspt1	G1 to S phase transition 1. (486 aa)
	LOC103467450	Acylaminoacyl-peptide hydrolase. (700 aa)

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103468154	etf1	ENSPREP00000011827	ENSPREP00000002564	G1 to S phase transition 1, like.	Eukaryotic translation termination factor 1b.	0.912
LOC103468154	gspt1	ENSPREP00000011827	ENSPREP00000024690	G1 to S phase transition 1, like.	G1 to S phase transition 1.	0.900
etf1	LOC103468154	ENSPREP00000002564	ENSPREP00000011827	Eukaryotic translation termination factor 1b.	G1 to S phase transition 1, like.	0.912
etf1	gspt1	ENSPREP00000002564	ENSPREP00000024690	Eukaryotic translation termination factor 1b.	G1 to S phase transition 1.	0.912
etf1	n6amt1	ENSPREP00000002564	ENSPREP00000009516	Eukaryotic translation termination factor 1b.	N-6 adenine-specific DNA methyltransferase 1.	0.885
etf1	trmt112	ENSPREP00000002564	ENSPREP00000022591	Eukaryotic translation termination factor 1b.	tRNA methyltransferase subunit 11-2.	0.851
gspt1	LOC103468154	ENSPREP00000024690	ENSPREP00000011827	G1 to S phase transition 1.	G1 to S phase transition 1, like.	0.900
gspt1	etf1	ENSPREP00000024690	ENSPREP00000002564	G1 to S phase transition 1.	Eukaryotic translation termination factor 1b.	0.912
n6amt1	etf1	ENSPREP00000009516	ENSPREP00000002564	N-6 adenine-specific DNA methyltransferase 1.	Eukaryotic translation termination factor 1b.	0.885
n6amt1	trmt112	ENSPREP00000009516	ENSPREP00000022591	N-6 adenine-specific DNA methyltransferase 1.	tRNA methyltransferase subunit 11-2.	0.999
trmt112	etf1	ENSPREP00000022591	ENSPREP00000002564	tRNA methyltransferase subunit 11-2.	Eukaryotic translation termination factor 1b.	0.851
trmt112	n6amt1	ENSPREP00000022591	ENSPREP00000009516	tRNA methyltransferase subunit 11-2.	N-6 adenine-specific DNA methyltransferase 1.	0.999