STRINGSTRING
ENSPREP00000009934 ENSPREP00000009934 LOC103472202 LOC103472202 ENSPREP00000012897 ENSPREP00000012897 ENSPREP00000012814 ENSPREP00000012814 LOC103474858 LOC103474858 ENSPREP00000012739 ENSPREP00000012739 LOC103474859 LOC103474859 taf1a taf1a LOC103479695 LOC103479695 polr1c polr1c ENSPREP00000027875 ENSPREP00000027875 LOC103467542 LOC103467542 LOC103475151 LOC103475151 H3-3B H3-3B ercc2 ercc2 gtf2h4 gtf2h4 znrd1 znrd1 taf1c taf1c ENSPREP00000029980 ENSPREP00000029980 ENSPREP00000030043 ENSPREP00000030043 gtf2h3 gtf2h3 ercc3 ercc3 ENSPREP00000033837 ENSPREP00000033837 polr2l polr2l LOC103474640 LOC103474640 LOC103481073 LOC103481073 polr2f polr2f LOC103481886 LOC103481886 mnat1 mnat1 ENSPREP00000011248 ENSPREP00000011248 ENSPREP00000011196 ENSPREP00000011196 ENSPREP00000011186 ENSPREP00000011186 polr2h polr2h LOC103471188 LOC103471188 ENSPREP00000009961 ENSPREP00000009961 POLR2E POLR2E ENSPREP00000009489 ENSPREP00000009489 ENSPREP00000009448 ENSPREP00000009448 ENSPREP00000009062 ENSPREP00000009062 ENSPREP00000008908 ENSPREP00000008908 ENSPREP00000007848 ENSPREP00000007848 ENSPREP00000007704 ENSPREP00000007704 ENSPREP00000007137 ENSPREP00000007137 LOC103461301 LOC103461301 H2AZ1 H2AZ1 gtf2h5 gtf2h5 ccnh ccnh twistnb twistnb polr1b polr1b cdk7 cdk7 polr1a polr1a tbpl2 tbpl2 ENSPREP00000002301 ENSPREP00000002301 LOC103460486 LOC103460486 ENSPREP00000012913 ENSPREP00000012913 LOC103462478 LOC103462478 LOC103472958 LOC103472958 ENSPREP00000000287 ENSPREP00000000287 ENSPREP00000000286 ENSPREP00000000286 taf1b taf1b ENSPREP00000020417 ENSPREP00000020417 gtf2h1 gtf2h1 Clg8h11orf88 Clg8h11orf88 LOC103470692 LOC103470692 LOC103470674 LOC103470674 rrn3 rrn3 tbpl1 tbpl1 LOC103476203 LOC103476203 tbp tbp ubtf ubtf polr1e polr1e ENSPREP00000013055 ENSPREP00000013055 ENSPREP00000013045 ENSPREP00000013045
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSPREP00000009934Uncharacterized protein; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (65 aa)
LOC103472202Chromobox homolog 3a (HP1 gamma homolog, Drosophila). (176 aa)
ENSPREP00000012897Histone H2B; Belongs to the histone H2B family. (140 aa)
ENSPREP00000012814Uncharacterized protein. (74 aa)
LOC103474858Histone H3; Belongs to the histone H3 family. (138 aa)
ENSPREP00000012739Histone H2B; Belongs to the histone H2B family. (120 aa)
LOC103474859Histone domain-containing protein. (111 aa)
taf1aTATA box binding protein (TBP)-associated factor, RNA polymerase I, A. (417 aa)
LOC103479695Histone H2B; Belongs to the histone H2B family. (116 aa)
polr1cRNA polymerase I and III subunit C. (346 aa)
ENSPREP00000027875Histone H3; Belongs to the histone H3 family. (96 aa)
LOC103467542Histone H2B; Belongs to the histone H2B family. (124 aa)
LOC103475151Uncharacterized protein. (340 aa)
H3-3BHistone H3; Belongs to the histone H3 family. (138 aa)
ercc2Excision repair cross-complementation group 2. (655 aa)
gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (434 aa)
znrd1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (118 aa)
taf1cWu:fj64h06. (921 aa)
ENSPREP00000029980Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (95 aa)
ENSPREP00000030043Histone H2B; Belongs to the histone H2B family. (161 aa)
gtf2h3General transcription factor IIH, polypeptide 3. (277 aa)
ercc3Excision repair cross-complementation group 3. (783 aa)
ENSPREP00000033837Histone H2A; Belongs to the histone H2A family. (136 aa)
polr2lPolymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
LOC103474640Histone H2A; Belongs to the histone H2A family. (138 aa)
LOC103481073Histone H3.3. (136 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (98 aa)
LOC103481886Uncharacterized protein. (302 aa)
mnat1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (311 aa)
ENSPREP00000011248Histone H2B; Belongs to the histone H2B family. (120 aa)
ENSPREP00000011196Histone H2A; Belongs to the histone H2A family. (130 aa)
ENSPREP00000011186Histone H2A; Belongs to the histone H2A family. (130 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
LOC103471188Germ cell nuclear acidic peptidase. (437 aa)
ENSPREP00000009961annotation not available (65 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
ENSPREP00000009489Zgc:163040. (93 aa)
ENSPREP00000009448Histone H2B; Belongs to the histone H2B family. (110 aa)
ENSPREP00000009062Si:ch211-113a14.22; Belongs to the histone H2B family. (119 aa)
ENSPREP00000008908Histone H2B; Belongs to the histone H2B family. (134 aa)
ENSPREP00000007848Histone H2B; Belongs to the histone H2B family. (119 aa)
ENSPREP00000007704Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (98 aa)
ENSPREP00000007137Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (93 aa)
LOC103461301Histone H3; Belongs to the histone H3 family. (90 aa)
H2AZ1Histone H2A; Belongs to the histone H2A family. (128 aa)
gtf2h5General transcription factor IIH, polypeptide 5. (71 aa)
ccnhCyclin H; Belongs to the cyclin family. (319 aa)
twistnbUncharacterized protein. (369 aa)
polr1bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1134 aa)
cdk7Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (387 aa)
polr1aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1695 aa)
tbpl2Uncharacterized protein. (307 aa)
ENSPREP00000002301Histone H3; Belongs to the histone H3 family. (92 aa)
LOC103460486Upstream binding transcription factor, like. (701 aa)
ENSPREP00000012913Histone domain-containing protein. (159 aa)
LOC103462478Histone H2A; Belongs to the histone H2A family. (134 aa)
LOC103472958Histone H2B; Belongs to the histone H2B family. (124 aa)
ENSPREP00000000287Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (93 aa)
ENSPREP00000000286Histone H2A; Belongs to the histone H2A family. (128 aa)
taf1bTATA box binding protein (Tbp)-associated factor, RNA polymerase I, B. (545 aa)
ENSPREP00000020417Histone H2A; Belongs to the histone H2A family. (144 aa)
gtf2h1General transcription factor IIH, polypeptide 1. (550 aa)
Clg8h11orf88Uncharacterized protein. (152 aa)
LOC103470692Histone H2A; Belongs to the histone H2A family. (128 aa)
LOC103470674General transcription factor IIH subunit. (420 aa)
rrn3RRN3 homolog, RNA polymerase I transcription factor. (610 aa)
tbpl1TBP-like 1. (187 aa)
LOC103476203Histone domain-containing protein. (203 aa)
tbpTATA box binding protein. (301 aa)
ubtfUpstream binding transcription factor. (736 aa)
polr1eRNA polymerase I subunit E. (414 aa)
ENSPREP00000013055Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (149 aa)
ENSPREP00000013045Histone H2B; Belongs to the histone H2B family. (157 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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