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LOC103470674 LOC103470674 polr2a polr2a taf3 taf3 TAF4 TAF4 ENSPREP00000011339 ENSPREP00000011339 gtf2b gtf2b polr2h polr2h POLR2E POLR2E taf11 taf11 Taf12 Taf12 gtf2h5 gtf2h5 ccnh ccnh polr2i polr2i taf13 taf13 LOC103459886 LOC103459886 polr2c polr2c cdk7 cdk7 tbpl2 tbpl2 ENSPREP00000001027 ENSPREP00000001027 taf5 taf5 mnat1 mnat1 polr2j polr2j gtf2e1 gtf2e1 LOC103461004 LOC103461004 ENSPREP00000019960 ENSPREP00000019960 gtf2h1 gtf2h1 Clg8h11orf88 Clg8h11orf88 gtf2a2 gtf2a2 tbp tbp ENSPREP00000034063 ENSPREP00000034063 polr2l polr2l taf6 taf6 LOC103475759 LOC103475759 taf5l taf5l polr2d polr2d ercc3 ercc3 gtf2f2 gtf2f2 gtf2h3 gtf2h3 gtf2h4 gtf2h4 ercc2 ercc2 gtf2a1 gtf2a1 taf10 taf10 LOC103466384 LOC103466384 polr2f polr2f polr2g polr2g LOC103465090 LOC103465090 LOC103481886 LOC103481886 gtf2e2 gtf2e2 taf2 taf2 tbpl1 tbpl1 polr2b polr2b taf7l taf7l ENSPREP00000012814 ENSPREP00000012814
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103470674General transcription factor IIH subunit. (420 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1966 aa)
taf3TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto. (896 aa)
TAF4TATA-box binding protein associated factor 4. (878 aa)
ENSPREP00000011339TAF4 domain-containing protein. (249 aa)
gtf2bGeneral transcription factor IIB. (318 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
taf11TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (196 aa)
Taf12TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (159 aa)
gtf2h5General transcription factor IIH, polypeptide 5. (71 aa)
ccnhCyclin H; Belongs to the cyclin family. (319 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
taf13TATA-box binding protein associated factor 13. (188 aa)
LOC103459886TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (253 aa)
polr2cPolymerase (RNA) II (DNA directed) polypeptide C. (273 aa)
cdk7Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (387 aa)
tbpl2Uncharacterized protein. (307 aa)
ENSPREP00000001027Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (467 aa)
taf5TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (745 aa)
mnat1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (311 aa)
polr2jPolymerase (RNA) II (DNA directed) polypeptide J. (117 aa)
gtf2e1General transcription factor IIE, polypeptide 1, alpha. (462 aa)
LOC103461004General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (267 aa)
ENSPREP00000019960WD_REPEATS_REGION domain-containing protein. (326 aa)
gtf2h1General transcription factor IIH, polypeptide 1. (550 aa)
Clg8h11orf88Uncharacterized protein. (152 aa)
gtf2a2Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
tbpTATA box binding protein. (301 aa)
ENSPREP00000034063General transcription factor IIA, 1-like. (327 aa)
polr2lPolymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
taf6TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (637 aa)
LOC103475759Transcription initiation factor TFIID subunit. (1985 aa)
taf5lTAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. (599 aa)
polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (104 aa)
ercc3Excision repair cross-complementation group 3. (783 aa)
gtf2f2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (312 aa)
gtf2h3General transcription factor IIH, polypeptide 3. (277 aa)
gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (434 aa)
ercc2Excision repair cross-complementation group 2. (655 aa)
gtf2a1General transcription factor IIA, 1. (393 aa)
taf10TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (186 aa)
LOC103466384TAFH domain-containing protein. (863 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (98 aa)
polr2gPolymerase (RNA) II (DNA directed) polypeptide G-like. (172 aa)
LOC103465090TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor. (852 aa)
LOC103481886Uncharacterized protein. (302 aa)
gtf2e2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (287 aa)
taf2TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (1119 aa)
tbpl1TBP-like 1. (187 aa)
polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
taf7lTAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (383 aa)
ENSPREP00000012814Uncharacterized protein. (74 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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