96 items (Poecilia reticulata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rnf144a	RBR-type E3 ubiquitin transferase. (295 aa)
	LOC103475719	Ras-related GTP binding A. (373 aa)
	ube2r2	Ubiquitin-conjugating enzyme E2R 2; Belongs to the ubiquitin-conjugating enzyme family. (262 aa)
	ENSPREP00000030043	Histone H2B; Belongs to the histone H2B family. (161 aa)
	rnf181	Ring finger protein 181. (157 aa)
	LOC103467425	Zgc:194242. (404 aa)
	usp7	Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family. (1186 aa)
	rtf1	RTF1 homolog, Paf1/RNA polymerase II complex component. (663 aa)
	LOC103467542	Histone H2B; Belongs to the histone H2B family. (124 aa)
	leo1	LEO1 homolog, Paf1/RNA polymerase II complex component. (631 aa)
	yipf4	Protein YIPF. (237 aa)
	ube2g2	Ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast). (154 aa)
	LOC103466094	Ubiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. (209 aa)
	ube2w	UBIQUITIN_CONJUGAT_2 domain-containing protein. (158 aa)
	rnf40	E3 ubiquitin protein ligase. (907 aa)
	ENSPREP00000026019	UBIQUITIN_CONJUGAT_2 domain-containing protein. (124 aa)
	LOC103466080	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (183 aa)
	ENSPREP00000024682	KxDL motif containing 1. (197 aa)
	LOC103479849	Uncharacterized protein. (1011 aa)
	pex2	Peroxisomal biogenesis factor 2. (335 aa)
	pex14	Peroxisomal biogenesis factor 14. (374 aa)
	LOC103469522	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (210 aa)
	shprh	SNF2 histone linker PHD RING helicase. (1690 aa)
	LOC103466428	Ubiquitin-conjugating enzyme E2Q family member 2. (336 aa)
	LOC103473220	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
	LOC103480592	Plac8 onzin related protein 3. (123 aa)
	ube2c	Ubiquitin-conjugating enzyme E2C; Belongs to the ubiquitin-conjugating enzyme family. (183 aa)
	ENSPREP00000022666	Peroxisomal biogenesis factor 5-like a. (491 aa)
	LOC103473189	Uncharacterized protein. (154 aa)
	LOC103471961	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (206 aa)
	ube2e1	Ubiquitin-conjugating enzyme E2E 1; Belongs to the ubiquitin-conjugating enzyme family. (195 aa)
	LOC103476258	Uncharacterized protein. (181 aa)
	LOC103476257	Uncharacterized protein. (128 aa)
	ENSPREP00000019718	UBIQUITIN_CONJUGAT_2 domain-containing protein. (71 aa)
	wac	WW domain containing adaptor with coiled-coil a. (543 aa)
	wdr61	WD repeat domain 61. (305 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	pex5	Peroxisomal biogenesis factor 5. (639 aa)
	ube2a	Ubiquitin-conjugating enzyme E2A (RAD6 homolog); Belongs to the ubiquitin-conjugating enzyme family. (207 aa)
	pcna	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
	LOC103463544	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (262 aa)
	ube2n	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (153 aa)
	LOC103480488	Plac8 onzin related protein 1. (127 aa)
	LOC103458978	Zgc:123321. (274 aa)
	hltf	Helicase-like transcription factor. (961 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	LOC103471799	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
	UBE2D1	Ubiquitin conjugating enzyme E2 D1; Belongs to the ubiquitin-conjugating enzyme family. (157 aa)
	paf1	PAF1 homolog, Paf1/RNA polymerase II complex component. (531 aa)
	prkdc	Protein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family. (3907 aa)
	rad18	RAD18 E3 ubiquitin protein ligase. (493 aa)
	ENSPREP00000013045	Histone H2B; Belongs to the histone H2B family. (157 aa)
	ENSPREP00000012897	Histone H2B; Belongs to the histone H2B family. (140 aa)
	ENSPREP00000012739	Histone H2B; Belongs to the histone H2B family. (120 aa)
	ube2g1	Ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family. (170 aa)
	ube2v2	Ubiquitin-conjugating enzyme E2 variant 2. (149 aa)
	ube2s	Ubiquitin-conjugating enzyme E2S; Belongs to the ubiquitin-conjugating enzyme family. (203 aa)
	LOC103479695	Histone H2B; Belongs to the histone H2B family. (116 aa)
	ube2d3	Ubiquitin-conjugating enzyme E2D 3; Belongs to the ubiquitin-conjugating enzyme family. (167 aa)
	ube2k	Ubiquitin-conjugating enzyme E2Kb (UBC1 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family. (157 aa)
	ENSPREP00000011248	Histone H2B; Belongs to the histone H2B family. (120 aa)
	ENSPREP00000009964	Ubiquitin-like domain-containing protein. (95 aa)
	ubb	Uncharacterized protein. (179 aa)
	ube2z	Ubiquitin-conjugating enzyme E2Z. (405 aa)
	OTULIN	OTU deubiquitinase with linear linkage specificity. (399 aa)
	aktip	Akt interacting protein. (296 aa)
	ENSPREP00000009448	Histone H2B; Belongs to the histone H2B family. (110 aa)
	uba6	Ubiquitin like modifier activating enzyme 6. (1044 aa)
	pex10	Peroxisomal biogenesis factor 10. (323 aa)
	pex12	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. (349 aa)
	uchl3	Ubiquitin carboxyl-terminal hydrolase. (233 aa)
	ENSPREP00000009062	Si:ch211-113a14.22; Belongs to the histone H2B family. (119 aa)
	ENSPREP00000008908	Histone H2B; Belongs to the histone H2B family. (134 aa)
	cdc73	Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). (576 aa)
	yipf5	Protein YIPF. (257 aa)
	ENSPREP00000007848	Histone H2B; Belongs to the histone H2B family. (119 aa)
	ube2b	Ubiquitin-conjugating enzyme E2B (RAD6 homolog); Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
	LOC103478912	Ubiquitin specific peptidase 9; Belongs to the peptidase C19 family. (2628 aa)
	LOC103462696	Ubiquitin-conjugating enzyme E2Q family member 1. (374 aa)
	cinp	Cyclin-dependent kinase 2 interacting protein. (209 aa)
	LOC103471054	Ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
	LOC103459260	Ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family. (183 aa)
	LOC103478965	WW domain-containing protein. (511 aa)
	tmem129	Transmembrane protein 129, E3 ubiquitin protein ligase. (338 aa)
	LOC103471296	E3 ubiquitin protein ligase. (975 aa)
	LOC103477709	Ubiquitin-conjugating enzyme E2E 2; Belongs to the ubiquitin-conjugating enzyme family. (201 aa)
	selenos	Selenoprotein S. (188 aa)
	LOC103471315	Ubiquitin conjugating enzyme E2 K; Belongs to the ubiquitin-conjugating enzyme family. (204 aa)
	LOC103477708	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (194 aa)
	ENSPREP00000001588	Ubiquitin-conjugating enzyme E2 variant 1. (146 aa)
	LOC103460472	Peroxisomal biogenesis factor 5-like b. (563 aa)
	LOC103472958	Histone H2B; Belongs to the histone H2B family. (124 aa)
	ctr9	CTR9 homolog, Paf1/RNA polymerase II complex component. (1154 aa)
	slc39a13	Solute carrier family 39 member 13. (381 aa)
	LOC103459783	Ubiquitin conjugating enzyme E2 A, like; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
	rnf152	Ring finger protein 152. (177 aa)

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPREP00000001588	ENSPREP00000009964	ENSPREP00000001588	ENSPREP00000009964	Ubiquitin-conjugating enzyme E2 variant 1.	Ubiquitin-like domain-containing protein.	0.804
ENSPREP00000001588	ENSPREP00000019718	ENSPREP00000001588	ENSPREP00000019718	Ubiquitin-conjugating enzyme E2 variant 1.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.655
ENSPREP00000001588	ENSPREP00000026019	ENSPREP00000001588	ENSPREP00000026019	Ubiquitin-conjugating enzyme E2 variant 1.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.655
ENSPREP00000001588	LOC103459260	ENSPREP00000001588	ENSPREP00000005733	Ubiquitin-conjugating enzyme E2 variant 1.	Ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family.	0.632
ENSPREP00000001588	LOC103459783	ENSPREP00000001588	ENSPREP00000033554	Ubiquitin-conjugating enzyme E2 variant 1.	Ubiquitin conjugating enzyme E2 A, like; Belongs to the ubiquitin-conjugating enzyme family.	0.715
ENSPREP00000001588	LOC103462696	ENSPREP00000001588	ENSPREP00000007032	Ubiquitin-conjugating enzyme E2 variant 1.	Ubiquitin-conjugating enzyme E2Q family member 1.	0.523
ENSPREP00000001588	LOC103463544	ENSPREP00000001588	ENSPREP00000017865	Ubiquitin-conjugating enzyme E2 variant 1.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.655
ENSPREP00000001588	LOC103466080	ENSPREP00000001588	ENSPREP00000025350	Ubiquitin-conjugating enzyme E2 variant 1.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.632
ENSPREP00000001588	LOC103466094	ENSPREP00000001588	ENSPREP00000026505	Ubiquitin-conjugating enzyme E2 variant 1.	Ubiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.	0.945
ENSPREP00000001588	LOC103466428	ENSPREP00000001588	ENSPREP00000023400	Ubiquitin-conjugating enzyme E2 variant 1.	Ubiquitin-conjugating enzyme E2Q family member 2.	0.523
ENSPREP00000001588	LOC103467425	ENSPREP00000001588	ENSPREP00000029182	Ubiquitin-conjugating enzyme E2 variant 1.	Zgc:194242.	0.667
ENSPREP00000001588	LOC103469522	ENSPREP00000001588	ENSPREP00000023813	Ubiquitin-conjugating enzyme E2 variant 1.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.744
ENSPREP00000001588	LOC103471054	ENSPREP00000001588	ENSPREP00000006161	Ubiquitin-conjugating enzyme E2 variant 1.	Ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family.	0.645
ENSPREP00000001588	LOC103471315	ENSPREP00000001588	ENSPREP00000003043	Ubiquitin-conjugating enzyme E2 variant 1.	Ubiquitin conjugating enzyme E2 K; Belongs to the ubiquitin-conjugating enzyme family.	0.797
ENSPREP00000001588	LOC103471799	ENSPREP00000001588	ENSPREP00000016422	Ubiquitin-conjugating enzyme E2 variant 1.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.645
ENSPREP00000001588	LOC103471961	ENSPREP00000001588	ENSPREP00000020367	Ubiquitin-conjugating enzyme E2 variant 1.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.634
ENSPREP00000001588	LOC103473189	ENSPREP00000001588	ENSPREP00000021152	Ubiquitin-conjugating enzyme E2 variant 1.	Uncharacterized protein.	0.850
ENSPREP00000001588	LOC103473220	ENSPREP00000001588	ENSPREP00000023168	Ubiquitin-conjugating enzyme E2 variant 1.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.788
ENSPREP00000001588	LOC103476257	ENSPREP00000001588	ENSPREP00000019959	Ubiquitin-conjugating enzyme E2 variant 1.	Uncharacterized protein.	0.572
ENSPREP00000001588	LOC103476258	ENSPREP00000001588	ENSPREP00000019968	Ubiquitin-conjugating enzyme E2 variant 1.	Uncharacterized protein.	0.572