(4 nodes) ABC transporter transmembrane region 2 network (Poecilia reticulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103460228	ATP-binding cassette, sub-family D (ALD), member 1. (785 aa)
	abcd3	ATP-binding cassette, sub-family D (ALD), member 3a. (659 aa)
	abcd2	ATP-binding cassette, sub-family D (ALD), member 2. (790 aa)
	abcd4	ATP-binding cassette, sub-family D (ALD), member 4. (617 aa)

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103460228	abcd3	ENSPREP00000018941	ENSPREP00000008027	ATP-binding cassette, sub-family D (ALD), member 1.	ATP-binding cassette, sub-family D (ALD), member 3a.	0.788
LOC103460228	abcd4	ENSPREP00000018941	ENSPREP00000029396	ATP-binding cassette, sub-family D (ALD), member 1.	ATP-binding cassette, sub-family D (ALD), member 4.	0.725
abcd2	abcd3	ENSPREP00000011112	ENSPREP00000008027	ATP-binding cassette, sub-family D (ALD), member 2.	ATP-binding cassette, sub-family D (ALD), member 3a.	0.788
abcd2	abcd4	ENSPREP00000011112	ENSPREP00000029396	ATP-binding cassette, sub-family D (ALD), member 2.	ATP-binding cassette, sub-family D (ALD), member 4.	0.722
abcd3	LOC103460228	ENSPREP00000008027	ENSPREP00000018941	ATP-binding cassette, sub-family D (ALD), member 3a.	ATP-binding cassette, sub-family D (ALD), member 1.	0.788
abcd3	abcd2	ENSPREP00000008027	ENSPREP00000011112	ATP-binding cassette, sub-family D (ALD), member 3a.	ATP-binding cassette, sub-family D (ALD), member 2.	0.788
abcd4	LOC103460228	ENSPREP00000029396	ENSPREP00000018941	ATP-binding cassette, sub-family D (ALD), member 4.	ATP-binding cassette, sub-family D (ALD), member 1.	0.725
abcd4	abcd2	ENSPREP00000029396	ENSPREP00000011112	ATP-binding cassette, sub-family D (ALD), member 4.	ATP-binding cassette, sub-family D (ALD), member 2.	0.722