STRINGSTRING
actb actb GOT1 GOT1 got1 got1 TGFB3 TGFB3 tgfb3 tgfb3 got2 got2 tgfb2 tgfb2 LOC103475119 LOC103475119
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
actbUncharacterized protein. (375 aa)
GOT1Aspartate aminotransferase. (463 aa)
got1Aspartate aminotransferase. (398 aa)
TGFB3Transforming growth factor beta; Belongs to the TGF-beta family. (407 aa)
tgfb3Transforming growth factor beta; Belongs to the TGF-beta family. (408 aa)
got2Aspartate aminotransferase. (393 aa)
tgfb2Transforming growth factor beta; Belongs to the TGF-beta family. (414 aa)
LOC103475119Transforming growth factor beta; Belongs to the TGF-beta family. (380 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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