42 items (Xiphophorus maculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102234827	RAB33A, member RAS oncogene family. (282 aa)
	trappc4	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (219 aa)
	trappc10	Trafficking protein particle complex 10. (1264 aa)
	LOC102236194	RAB33B, member RAS oncogene family a. (240 aa)
	LOC102236184	Zgc:171927. (214 aa)
	rabl6	RAB, member RAS oncogene family-like 6b. (748 aa)
	LOC102231865	Uncharacterized protein. (203 aa)
	trappc1	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (135 aa)
	rab15	RAB15, member RAS oncogene family. (213 aa)
	trappc3	Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi. (180 aa)
	trappc11	Trafficking protein particle complex 11. (1123 aa)
	LOC102217081	Zgc:101559. (234 aa)
	rabggta	Rab geranylgeranyltransferase subunit alpha. (585 aa)
	M4AIP1_XIPMA	ATG16 autophagy related 16-like 2 (S. cerevisiae). (283 aa)
	LOC102237419	RAB15, member RAS oncogene family. (210 aa)
	rab3gap1	RAB3 GTPase activating protein subunit 1. (967 aa)
	LOC102218920	Uncharacterized protein. (202 aa)
	ptar1	Protein prenyltransferase alpha subunit repeat containing 1. (456 aa)
	LOC102219512	Trafficking protein particle complex 6b-like. (163 aa)
	rab3gap2	RAB3 GTPase activating protein subunit 2 (non-catalytic). (1373 aa)
	RAB19	RAB19, member RAS oncogene family. (232 aa)
	ENSXMAP00000020639	Uncharacterized protein. (111 aa)
	LOC102237935	Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family. (429 aa)
	trappc13	Trafficking protein particle complex 13. (417 aa)
	trappc8	Trafficking protein particle complex 8. (1451 aa)
	rabggtb	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (332 aa)
	LOC102232639	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (442 aa)
	LOC102230669	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (447 aa)
	rab18	RAB18A, member RAS oncogene family. (204 aa)
	LOC102220727	RAB42, member RAS oncogene family a. (218 aa)
	trappc9	Trafficking protein particle complex 9. (996 aa)
	LOC102225655	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (447 aa)
	LOC102221304	Lebercilin LCA5. (806 aa)
	tbc1d25	TBC1 domain family, member 25. (846 aa)
	RAB37	RAB37, member RAS oncogene family. (241 aa)
	LOC102221052	CHM Rab escort protein. (697 aa)
	TRAPPC5	Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi. (188 aa)
	trappc2	Trafficking protein particle complex 2. (140 aa)
	trappc12	Trafficking protein particle complex 12. (814 aa)
	LOC102236931	ZRAB1B, member RAS oncogene family a. (201 aa)
	RAB41	RAB41, member RAS oncogene family. (211 aa)
	trappc2l	Trafficking protein particle complex 2-like. (143 aa)

Your Current Organism:

Xiphophorus maculatus

NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSXMAP00000020639	LOC102217081	ENSXMAP00000020639	ENSXMAP00000011193	Uncharacterized protein.	Zgc:101559.	0.673
ENSXMAP00000020639	LOC102218920	ENSXMAP00000020639	ENSXMAP00000015808	Uncharacterized protein.	Uncharacterized protein.	0.808
ENSXMAP00000020639	LOC102219512	ENSXMAP00000020639	ENSXMAP00000018237	Uncharacterized protein.	Trafficking protein particle complex 6b-like.	0.974
ENSXMAP00000020639	LOC102221304	ENSXMAP00000020639	ENSXMAP00000027278	Uncharacterized protein.	Lebercilin LCA5.	0.951
ENSXMAP00000020639	LOC102225655	ENSXMAP00000020639	ENSXMAP00000027133	Uncharacterized protein.	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	0.482
ENSXMAP00000020639	LOC102230669	ENSXMAP00000020639	ENSXMAP00000023085	Uncharacterized protein.	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	0.482
ENSXMAP00000020639	LOC102231865	ENSXMAP00000020639	ENSXMAP00000005770	Uncharacterized protein.	Uncharacterized protein.	0.808
ENSXMAP00000020639	LOC102232639	ENSXMAP00000020639	ENSXMAP00000022139	Uncharacterized protein.	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	0.482
ENSXMAP00000020639	LOC102234827	ENSXMAP00000020639	ENSXMAP00000000836	Uncharacterized protein.	RAB33A, member RAS oncogene family.	0.673
ENSXMAP00000020639	LOC102236184	ENSXMAP00000020639	ENSXMAP00000004695	Uncharacterized protein.	Zgc:171927.	0.808
ENSXMAP00000020639	LOC102236194	ENSXMAP00000020639	ENSXMAP00000004153	Uncharacterized protein.	RAB33B, member RAS oncogene family a.	0.673
ENSXMAP00000020639	LOC102236931	ENSXMAP00000020639	ENSXMAP00000037874	Uncharacterized protein.	ZRAB1B, member RAS oncogene family a.	0.808
ENSXMAP00000020639	LOC102237935	ENSXMAP00000020639	ENSXMAP00000020889	Uncharacterized protein.	Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family.	0.673
ENSXMAP00000020639	RAB19	ENSXMAP00000020639	ENSXMAP00000019309	Uncharacterized protein.	RAB19, member RAS oncogene family.	0.673
ENSXMAP00000020639	TRAPPC5	ENSXMAP00000020639	ENSXMAP00000031728	Uncharacterized protein.	Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.	0.401
ENSXMAP00000020639	rabl6	ENSXMAP00000020639	ENSXMAP00000004927	Uncharacterized protein.	RAB, member RAS oncogene family-like 6b.	0.673
ENSXMAP00000020639	trappc1	ENSXMAP00000020639	ENSXMAP00000007392	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.984
ENSXMAP00000020639	trappc10	ENSXMAP00000020639	ENSXMAP00000001282	Uncharacterized protein.	Trafficking protein particle complex 10.	0.982
ENSXMAP00000020639	trappc11	ENSXMAP00000020639	ENSXMAP00000011033	Uncharacterized protein.	Trafficking protein particle complex 11.	0.963
ENSXMAP00000020639	trappc12	ENSXMAP00000020639	ENSXMAP00000037739	Uncharacterized protein.	Trafficking protein particle complex 12.	0.901