STRINGSTRING
LOC102235314 LOC102235314 prorp prorp trmt10c trmt10c LOC111608152 LOC111608152 trmt10a trmt10a hsd17b10 hsd17b10
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC102235314Multidrug and toxin extrusion protein; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family. (584 aa)
prorpProtein only RNase P catalytic subunit. (593 aa)
trmt10ctRNA methyltransferase 10C, mitochondrial RNase P subunit. (507 aa)
LOC111608152Hydroxysteroid (17-beta) dehydrogenase 10. (293 aa)
trmt10atRNA methyltransferase 10A. (362 aa)
hsd17b10Hydroxysteroid (17-beta) dehydrogenase 10. (322 aa)
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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