(11 nodes) ESCRT III complex, and Multivesicular body assembly network (Xiphophorus maculatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	chmp2b	Charged multivesicular body protein 2Bb. (216 aa)
	LOC102227389	Uncharacterized protein; Belongs to the AAA ATPase family. (435 aa)
	chmp1b	Chromatin modifying protein 1B. (199 aa)
	chmp2a	Charged multivesicular body protein 2A. (221 aa)
	VPS4B	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. (437 aa)
	ist1	IST1 factor associated with ESCRT-III. (348 aa)
	LOC102228592	Uncharacterized protein. (229 aa)
	chmp3	Charged multivesicular body protein 3. (221 aa)
	vta1	Vesicle (multivesicular body) trafficking 1. (320 aa)
	chmp1a	Charged multivesicular body protein 1A. (181 aa)
	vps4a	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family. (475 aa)

Your Current Organism:

Xiphophorus maculatus

NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102227389	LOC102228592	ENSXMAP00000011272	ENSXMAP00000020670	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.970
LOC102227389	VPS4B	ENSXMAP00000011272	ENSXMAP00000016532	Uncharacterized protein; Belongs to the AAA ATPase family.	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	0.900
LOC102227389	chmp1a	ENSXMAP00000011272	ENSXMAP00000035886	Uncharacterized protein; Belongs to the AAA ATPase family.	Charged multivesicular body protein 1A.	0.970
LOC102227389	chmp1b	ENSXMAP00000011272	ENSXMAP00000012135	Uncharacterized protein; Belongs to the AAA ATPase family.	Chromatin modifying protein 1B.	0.970
LOC102227389	chmp2a	ENSXMAP00000011272	ENSXMAP00000014922	Uncharacterized protein; Belongs to the AAA ATPase family.	Charged multivesicular body protein 2A.	0.936
LOC102227389	chmp2b	ENSXMAP00000011272	ENSXMAP00000008804	Uncharacterized protein; Belongs to the AAA ATPase family.	Charged multivesicular body protein 2Bb.	0.829
LOC102227389	chmp3	ENSXMAP00000011272	ENSXMAP00000023425	Uncharacterized protein; Belongs to the AAA ATPase family.	Charged multivesicular body protein 3.	0.854
LOC102227389	ist1	ENSXMAP00000011272	ENSXMAP00000018353	Uncharacterized protein; Belongs to the AAA ATPase family.	IST1 factor associated with ESCRT-III.	0.915
LOC102227389	vps4a	ENSXMAP00000011272	ENSXMAP00000039890	Uncharacterized protein; Belongs to the AAA ATPase family.	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family.	0.937
LOC102227389	vta1	ENSXMAP00000011272	ENSXMAP00000026369	Uncharacterized protein; Belongs to the AAA ATPase family.	Vesicle (multivesicular body) trafficking 1.	0.993
LOC102228592	LOC102227389	ENSXMAP00000020670	ENSXMAP00000011272	Uncharacterized protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.970
LOC102228592	VPS4B	ENSXMAP00000020670	ENSXMAP00000016532	Uncharacterized protein.	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	0.970
LOC102228592	chmp1a	ENSXMAP00000020670	ENSXMAP00000035886	Uncharacterized protein.	Charged multivesicular body protein 1A.	0.903
LOC102228592	chmp1b	ENSXMAP00000020670	ENSXMAP00000012135	Uncharacterized protein.	Chromatin modifying protein 1B.	0.901
LOC102228592	chmp2a	ENSXMAP00000020670	ENSXMAP00000014922	Uncharacterized protein.	Charged multivesicular body protein 2A.	0.990
LOC102228592	chmp2b	ENSXMAP00000020670	ENSXMAP00000008804	Uncharacterized protein.	Charged multivesicular body protein 2Bb.	0.957
LOC102228592	chmp3	ENSXMAP00000020670	ENSXMAP00000023425	Uncharacterized protein.	Charged multivesicular body protein 3.	0.886
LOC102228592	ist1	ENSXMAP00000020670	ENSXMAP00000018353	Uncharacterized protein.	IST1 factor associated with ESCRT-III.	0.904
LOC102228592	vps4a	ENSXMAP00000020670	ENSXMAP00000039890	Uncharacterized protein.	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family.	0.971
LOC102228592	vta1	ENSXMAP00000020670	ENSXMAP00000026369	Uncharacterized protein.	Vesicle (multivesicular body) trafficking 1.	0.988