(7 nodes) Insulin effects increased synthesis of Xylulose-5-Phosphate, and Sucrose metabolic process network (Xiphophorus maculatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	taldo1	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. (336 aa)
	LOC102219418	Fructose-1,6-bisphosphatase 1a; Belongs to the FBPase class 1 family. (337 aa)
	LOC102234635	Transketolase b. (626 aa)
	LOC102236105	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family. (363 aa)
	LOC102216440	Fructose-1,6-bisphosphatase 1a; Belongs to the FBPase class 1 family. (374 aa)
	LOC102224760	Transketolase a. (628 aa)
	LOC102231764	ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily. (835 aa)

Your Current Organism:

Xiphophorus maculatus

NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102216440	LOC102219418	ENSXMAP00000015601	ENSXMAP00000005331	Fructose-1,6-bisphosphatase 1a; Belongs to the FBPase class 1 family.	Fructose-1,6-bisphosphatase 1a; Belongs to the FBPase class 1 family.	0.901
LOC102216440	LOC102224760	ENSXMAP00000015601	ENSXMAP00000017095	Fructose-1,6-bisphosphatase 1a; Belongs to the FBPase class 1 family.	Transketolase a.	0.972
LOC102216440	LOC102231764	ENSXMAP00000015601	ENSXMAP00000031263	Fructose-1,6-bisphosphatase 1a; Belongs to the FBPase class 1 family.	ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily.	0.955
LOC102216440	LOC102234635	ENSXMAP00000015601	ENSXMAP00000008365	Fructose-1,6-bisphosphatase 1a; Belongs to the FBPase class 1 family.	Transketolase b.	0.972
LOC102216440	LOC102236105	ENSXMAP00000015601	ENSXMAP00000011771	Fructose-1,6-bisphosphatase 1a; Belongs to the FBPase class 1 family.	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.	0.961
LOC102216440	taldo1	ENSXMAP00000015601	ENSXMAP00000000024	Fructose-1,6-bisphosphatase 1a; Belongs to the FBPase class 1 family.	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.	0.985
LOC102219418	LOC102216440	ENSXMAP00000005331	ENSXMAP00000015601	Fructose-1,6-bisphosphatase 1a; Belongs to the FBPase class 1 family.	Fructose-1,6-bisphosphatase 1a; Belongs to the FBPase class 1 family.	0.901
LOC102219418	LOC102224760	ENSXMAP00000005331	ENSXMAP00000017095	Fructose-1,6-bisphosphatase 1a; Belongs to the FBPase class 1 family.	Transketolase a.	0.972
LOC102219418	LOC102231764	ENSXMAP00000005331	ENSXMAP00000031263	Fructose-1,6-bisphosphatase 1a; Belongs to the FBPase class 1 family.	ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily.	0.955
LOC102219418	LOC102234635	ENSXMAP00000005331	ENSXMAP00000008365	Fructose-1,6-bisphosphatase 1a; Belongs to the FBPase class 1 family.	Transketolase b.	0.972
LOC102219418	LOC102236105	ENSXMAP00000005331	ENSXMAP00000011771	Fructose-1,6-bisphosphatase 1a; Belongs to the FBPase class 1 family.	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.	0.961
LOC102219418	taldo1	ENSXMAP00000005331	ENSXMAP00000000024	Fructose-1,6-bisphosphatase 1a; Belongs to the FBPase class 1 family.	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.	0.985
LOC102224760	LOC102216440	ENSXMAP00000017095	ENSXMAP00000015601	Transketolase a.	Fructose-1,6-bisphosphatase 1a; Belongs to the FBPase class 1 family.	0.972
LOC102224760	LOC102219418	ENSXMAP00000017095	ENSXMAP00000005331	Transketolase a.	Fructose-1,6-bisphosphatase 1a; Belongs to the FBPase class 1 family.	0.972
LOC102224760	LOC102231764	ENSXMAP00000017095	ENSXMAP00000031263	Transketolase a.	ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily.	0.956
LOC102224760	LOC102234635	ENSXMAP00000017095	ENSXMAP00000008365	Transketolase a.	Transketolase b.	0.901
LOC102224760	LOC102236105	ENSXMAP00000017095	ENSXMAP00000011771	Transketolase a.	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.	0.960
LOC102224760	taldo1	ENSXMAP00000017095	ENSXMAP00000000024	Transketolase a.	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.	0.997
LOC102231764	LOC102216440	ENSXMAP00000031263	ENSXMAP00000015601	ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily.	Fructose-1,6-bisphosphatase 1a; Belongs to the FBPase class 1 family.	0.955
LOC102231764	LOC102219418	ENSXMAP00000031263	ENSXMAP00000005331	ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily.	Fructose-1,6-bisphosphatase 1a; Belongs to the FBPase class 1 family.	0.955