(40 nodes) Class I peroxisomal membrane protein import, and Acyl CoA binding protein network (Xiphophorus maculatus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102230672	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (315 aa)
	slc25a17	Solute carrier family 25 member 17; Belongs to the mitochondrial carrier (TC 2.A.29) family. (312 aa)
	mpv17l2	MPV17 mitochondrial membrane protein-like 2; Belongs to the peroxisomal membrane protein PXMP2/4 family. (218 aa)
	pex11a	Peroxisomal biogenesis factor 11 alpha. (243 aa)
	abcd1	ATP-binding cassette, sub-family D (ALD), member 1. (754 aa)
	pex26	Uncharacterized protein. (309 aa)
	LOC102234479	ATP-binding cassette, sub-family D (ALD), member 2. (737 aa)
	pex19	Peroxisomal biogenesis factor 19. (292 aa)
	acbd5	Acyl-CoA-binding domain-containing protein 5; Binds medium- and long-chain acyl-CoA esters. (488 aa)
	LOC102217245	Uncharacterized protein. (108 aa)
	LOC111610944	Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering. (148 aa)
	LOC102223454	Si:ch211-120k19.1; Belongs to the peroxisomal membrane protein PXMP2/4 family. (182 aa)
	LOC102224163	Uncharacterized protein; Belongs to the peroxisomal membrane protein PXMP2/4 family. (228 aa)
	lmbrd1	LMBR1 domain containing 1. (538 aa)
	pex16	Peroxisomal membrane protein PEX16. (339 aa)
	atad1	ATPase family AAA domain containing 1b; Belongs to the AAA ATPase family. (365 aa)
	LOC102221504	ATPase family AAA domain containing 1a; Belongs to the AAA ATPase family. (381 aa)
	pxmp2	Peroxisomal membrane protein 2; Belongs to the peroxisomal membrane protein PXMP2/4 family. (194 aa)
	acbd6	Acyl-CoA binding domain containing 6. (298 aa)
	pxmp4	Peroxisomal membrane protein 4; Belongs to the peroxisomal membrane protein PXMP2/4 family. (229 aa)
	acbd7	Acyl-CoA binding domain containing 7. (88 aa)
	DBI	ACB domain-containing protein. (95 aa)
	abcd4	ATP-binding cassette, sub-family D (ALD), member 4. (617 aa)
	gdap1	Ganglioside induced differentiation associated protein 1; Belongs to the GST superfamily. (362 aa)
	pex11b	Peroxisomal biogenesis factor 11 beta. (262 aa)
	LOC102216782	Si:busm1-52i16.2. (328 aa)
	gdap1l1	Ganglioside induced differentiation associated protein 1-like 1. (366 aa)
	SLC25A36	Solute carrier family 25 member 36b; Belongs to the mitochondrial carrier (TC 2.A.29) family. (311 aa)
	tmem135	Transmembrane protein 135. (494 aa)
	LOC102235524	Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering. (154 aa)
	nmt2	Glycylpeptide N-tetradecanoyltransferase; Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins; Belongs to the NMT family. (530 aa)
	LOC102228494	Acyl-CoA-binding domain-containing protein 5; Binds medium- and long-chain acyl-CoA esters. (500 aa)
	pex3	Peroxisomal biogenesis factor 3. (420 aa)
	nmt1	Glycylpeptide N-tetradecanoyltransferase; Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins; Belongs to the NMT family. (483 aa)
	pex11g	Peroxisomal biogenesis factor 11 gamma. (256 aa)
	Dbi	Diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein). (90 aa)
	abcd3	ATP-binding cassette, sub-family D (ALD), member 3a. (659 aa)
	LOC102226493	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (224 aa)
	LOC102230533	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (241 aa)
	slc25a33	Solute carrier family 25 member 33; Belongs to the mitochondrial carrier (TC 2.A.29) family. (313 aa)

Your Current Organism:

Xiphophorus maculatus

NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DBI	Dbi	ENSXMAP00000021428	ENSXMAP00000035647	ACB domain-containing protein.	Diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein).	0.903
DBI	LOC102217245	ENSXMAP00000021428	ENSXMAP00000010200	ACB domain-containing protein.	Uncharacterized protein.	0.489
DBI	LOC102221504	ENSXMAP00000021428	ENSXMAP00000018000	ACB domain-containing protein.	ATPase family AAA domain containing 1a; Belongs to the AAA ATPase family.	0.428
DBI	LOC102234479	ENSXMAP00000021428	ENSXMAP00000005026	ACB domain-containing protein.	ATP-binding cassette, sub-family D (ALD), member 2.	0.418
DBI	abcd1	ENSXMAP00000021428	ENSXMAP00000003486	ACB domain-containing protein.	ATP-binding cassette, sub-family D (ALD), member 1.	0.418
DBI	acbd7	ENSXMAP00000021428	ENSXMAP00000020582	ACB domain-containing protein.	Acyl-CoA binding domain containing 7.	0.903
DBI	atad1	ENSXMAP00000021428	ENSXMAP00000014475	ACB domain-containing protein.	ATPase family AAA domain containing 1b; Belongs to the AAA ATPase family.	0.428
DBI	pex16	ENSXMAP00000021428	ENSXMAP00000014111	ACB domain-containing protein.	Peroxisomal membrane protein PEX16.	0.447
DBI	pex19	ENSXMAP00000021428	ENSXMAP00000005457	ACB domain-containing protein.	Peroxisomal biogenesis factor 19.	0.471
DBI	pex3	ENSXMAP00000021428	ENSXMAP00000033531	ACB domain-containing protein.	Peroxisomal biogenesis factor 3.	0.545
DBI	pxmp4	ENSXMAP00000021428	ENSXMAP00000019417	ACB domain-containing protein.	Peroxisomal membrane protein 4; Belongs to the peroxisomal membrane protein PXMP2/4 family.	0.404
Dbi	DBI	ENSXMAP00000035647	ENSXMAP00000021428	Diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein).	ACB domain-containing protein.	0.903
Dbi	LOC102217245	ENSXMAP00000035647	ENSXMAP00000010200	Diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein).	Uncharacterized protein.	0.489
Dbi	LOC102221504	ENSXMAP00000035647	ENSXMAP00000018000	Diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein).	ATPase family AAA domain containing 1a; Belongs to the AAA ATPase family.	0.428
Dbi	LOC102234479	ENSXMAP00000035647	ENSXMAP00000005026	Diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein).	ATP-binding cassette, sub-family D (ALD), member 2.	0.418
Dbi	abcd1	ENSXMAP00000035647	ENSXMAP00000003486	Diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein).	ATP-binding cassette, sub-family D (ALD), member 1.	0.418
Dbi	acbd7	ENSXMAP00000035647	ENSXMAP00000020582	Diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein).	Acyl-CoA binding domain containing 7.	0.903
Dbi	atad1	ENSXMAP00000035647	ENSXMAP00000014475	Diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein).	ATPase family AAA domain containing 1b; Belongs to the AAA ATPase family.	0.428
Dbi	pex16	ENSXMAP00000035647	ENSXMAP00000014111	Diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein).	Peroxisomal membrane protein PEX16.	0.447
Dbi	pex19	ENSXMAP00000035647	ENSXMAP00000005457	Diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein).	Peroxisomal biogenesis factor 19.	0.471