(36 nodes) Fatty acid beta-oxidation, and Valine catabolic process network (Xiphophorus maculatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	etfdh	Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. (622 aa)
	etfa	Electron transfer flavoprotein subunit alpha. (333 aa)
	LOC102236075	Zgc:101569; Belongs to the enoyl-CoA hydratase/isomerase family. (309 aa)
	acox1	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (661 aa)
	hadhb	Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta; Belongs to the thiolase-like superfamily. Thiolase family. (473 aa)
	pccb	Propionyl-CoA carboxylase subunit beta. (561 aa)
	acox3	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (692 aa)
	LOC102237393	Uncharacterized protein. (107 aa)
	echs1	Enoyl CoA hydratase, short chain, 1, mitochondrial; Belongs to the enoyl-CoA hydratase/isomerase family. (291 aa)
	acaa2	Acetyl-CoA acyltransferase 2; Belongs to the thiolase-like superfamily. Thiolase family. (396 aa)
	pcca	Propionyl-CoA carboxylase subunit alpha. (711 aa)
	acadm	Acyl-CoA dehydrogenase medium chain. (422 aa)
	LOC102221845	Aldedh domain-containing protein. (529 aa)
	acadvl	Acyl-CoA dehydrogenase very long chain. (659 aa)
	hadha	Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b; Belongs to the enoyl-CoA hydratase/isomerase family. (763 aa)
	acadsb	Acyl-CoA dehydrogenase short/branched chain. (441 aa)
	LOC102221886	Aldehyde dehydrogenase 9 family, member A1b; Belongs to the aldehyde dehydrogenase family. (520 aa)
	acad8	Acyl-CoA dehydrogenase family, member 8. (419 aa)
	LOC102233725	Uncharacterized protein. (102 aa)
	acaa1	Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family. (425 aa)
	etfb	Electron transfer flavoprotein subunit beta. (254 aa)
	ECHDC1	Ethylmalonyl-CoA decarboxylase 1; Belongs to the enoyl-CoA hydratase/isomerase family. (312 aa)
	ACADL	Acyl-CoA dehydrogenase long chain. (438 aa)
	acss3	Acyl-CoA synthetase short chain family member 3. (700 aa)
	hsd17b4	Hydroxysteroid (17-beta) dehydrogenase 4. (737 aa)
	eci1	Enoyl-CoA delta isomerase 1; Belongs to the enoyl-CoA hydratase/isomerase family. (298 aa)
	LOC106700234	Acyl-CoA dehydrogenase long chain. (427 aa)
	LOC102218965	Zgc:85777. (434 aa)
	acads	Acyl-CoA dehydrogenase short chain. (405 aa)
	LOC102219361	3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. (326 aa)
	cpt2	Carnitine palmitoyltransferase 2; Belongs to the carnitine/choline acetyltransferase family. (683 aa)
	ehhadh	Enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. (718 aa)
	LOC102224840	3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. (329 aa)
	echdc2	Enoyl CoA hydratase domain containing 2; Belongs to the enoyl-CoA hydratase/isomerase family. (332 aa)
	aldh6a1	Aldehyde dehydrogenase 6 family member A1. (526 aa)
	hadh	Hydroxyacyl-CoA dehydrogenase. (318 aa)

Your Current Organism:

Xiphophorus maculatus

NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACADL	ECHDC1	ENSXMAP00000028877	ENSXMAP00000028349	Acyl-CoA dehydrogenase long chain.	Ethylmalonyl-CoA decarboxylase 1; Belongs to the enoyl-CoA hydratase/isomerase family.	0.631
ACADL	LOC102233725	ENSXMAP00000028877	ENSXMAP00000026746	Acyl-CoA dehydrogenase long chain.	Uncharacterized protein.	0.597
ACADL	LOC102236075	ENSXMAP00000028877	ENSXMAP00000006039	Acyl-CoA dehydrogenase long chain.	Zgc:101569; Belongs to the enoyl-CoA hydratase/isomerase family.	0.631
ACADL	LOC102237393	ENSXMAP00000028877	ENSXMAP00000013053	Acyl-CoA dehydrogenase long chain.	Uncharacterized protein.	0.597
ACADL	acaa1	ENSXMAP00000028877	ENSXMAP00000027068	Acyl-CoA dehydrogenase long chain.	Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.	0.968
ACADL	acaa2	ENSXMAP00000028877	ENSXMAP00000014614	Acyl-CoA dehydrogenase long chain.	Acetyl-CoA acyltransferase 2; Belongs to the thiolase-like superfamily. Thiolase family.	0.964
ACADL	acadm	ENSXMAP00000028877	ENSXMAP00000015011	Acyl-CoA dehydrogenase long chain.	Acyl-CoA dehydrogenase medium chain.	0.946
ACADL	acads	ENSXMAP00000028877	ENSXMAP00000035445	Acyl-CoA dehydrogenase long chain.	Acyl-CoA dehydrogenase short chain.	0.914
ACADL	acadsb	ENSXMAP00000028877	ENSXMAP00000016686	Acyl-CoA dehydrogenase long chain.	Acyl-CoA dehydrogenase short/branched chain.	0.915
ACADL	acadvl	ENSXMAP00000028877	ENSXMAP00000015518	Acyl-CoA dehydrogenase long chain.	Acyl-CoA dehydrogenase very long chain.	0.932
ACADL	acox1	ENSXMAP00000028877	ENSXMAP00000006077	Acyl-CoA dehydrogenase long chain.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.931
ACADL	acox3	ENSXMAP00000028877	ENSXMAP00000011887	Acyl-CoA dehydrogenase long chain.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.933
ACADL	acss3	ENSXMAP00000028877	ENSXMAP00000029068	Acyl-CoA dehydrogenase long chain.	Acyl-CoA synthetase short chain family member 3.	0.488
ACADL	cpt2	ENSXMAP00000028877	ENSXMAP00000035792	Acyl-CoA dehydrogenase long chain.	Carnitine palmitoyltransferase 2; Belongs to the carnitine/choline acetyltransferase family.	0.942
ACADL	echdc2	ENSXMAP00000028877	ENSXMAP00000038629	Acyl-CoA dehydrogenase long chain.	Enoyl CoA hydratase domain containing 2; Belongs to the enoyl-CoA hydratase/isomerase family.	0.665
ACADL	echs1	ENSXMAP00000028877	ENSXMAP00000013761	Acyl-CoA dehydrogenase long chain.	Enoyl CoA hydratase, short chain, 1, mitochondrial; Belongs to the enoyl-CoA hydratase/isomerase family.	0.961
ACADL	eci1	ENSXMAP00000028877	ENSXMAP00000032669	Acyl-CoA dehydrogenase long chain.	Enoyl-CoA delta isomerase 1; Belongs to the enoyl-CoA hydratase/isomerase family.	0.613
ACADL	ehhadh	ENSXMAP00000028877	ENSXMAP00000036336	Acyl-CoA dehydrogenase long chain.	Enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.962
ACADL	etfa	ENSXMAP00000028877	ENSXMAP00000003135	Acyl-CoA dehydrogenase long chain.	Electron transfer flavoprotein subunit alpha.	0.870
ACADL	etfb	ENSXMAP00000028877	ENSXMAP00000028291	Acyl-CoA dehydrogenase long chain.	Electron transfer flavoprotein subunit beta.	0.848