STRINGSTRING
umps umps Cad Cad LOC102236590 LOC102236590 LOC102216731 LOC102216731 LOC102235298 LOC102235298 dhodh dhodh dpyd dpyd LOC102231227 LOC102231227 LOC102231992 LOC102231992 GOLT1B GOLT1B
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
umpsUridine monophosphate synthetase. (487 aa)
CadCarbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase. (979 aa)
LOC102236590Collapsin response mediator protein 1. (676 aa)
LOC102216731NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (304 aa)
LOC102235298NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (299 aa)
dhodhDihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. (399 aa)
dpydDihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family. (1026 aa)
LOC102231227Golgi transport 1Bb. (250 aa)
LOC102231992Cytochrome b5 reductase 4. (531 aa)
GOLT1BGolgi transport 1B. (164 aa)
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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