STRINGSTRING
rps27a rps27a ube2j1 ube2j1 zfand4 zfand4 ube2z ube2z ube2r2 ube2r2 LOC102225258 LOC102225258 uba1 uba1 traf7 traf7 hltf hltf ube2w ube2w uba3 uba3 birc6 birc6 trip12 trip12 ubl7 ubl7 mysm1 mysm1 c1qtnf12 c1qtnf12 uba6 uba6 rnf4 rnf4 UBA3 UBA3 LOC102220506 LOC102220506 LOC102229941 LOC102229941 rnf8 rnf8 LOC102233395 LOC102233395 ube2m ube2m nae1 nae1 Ube2v2 Ube2v2 LOC102220928 LOC102220928 LOC102225848 LOC102225848 LOC102229617 LOC102229617 shprh shprh ube2j2 ube2j2 rad18 rad18 mib2 mib2 UBE2H UBE2H ube2g1 ube2g1 ube2n ube2n LOC102228788 LOC102228788 ube2h ube2h ube2k ube2k LOC102233854 LOC102233854 ube2e1 ube2e1 LOC102225181 LOC102225181 LOC102222270 LOC102222270 ENSXMAP00000036141 ENSXMAP00000036141 LOC102228562 LOC102228562 LOC102229303 LOC102229303 LOC102226945 LOC102226945 LOC102221826 LOC102221826 fau fau ube2v1 ube2v1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rps27aRibosomal protein S27a. (156 aa)
ube2j1Ubiquitin-conjugating enzyme E2, J1. (321 aa)
zfand4Zinc finger, AN1-type domain 4. (720 aa)
ube2zUbiquitin-conjugating enzyme E2Z. (405 aa)
ube2r2Ubiquitin-conjugating enzyme E2R 2; Belongs to the ubiquitin-conjugating enzyme family. (262 aa)
LOC102225258UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
uba1Ubiquitin-like modifier activating enzyme 1; Belongs to the ubiquitin-activating E1 family. (1057 aa)
traf7TNF receptor-associated factor 7. (687 aa)
hltfHelicase-like transcription factor. (962 aa)
ube2wUBIQUITIN_CONJUGAT_2 domain-containing protein. (151 aa)
uba3Ubiquitin-like modifier activating enzyme 3. (462 aa)
birc6Baculoviral IAP repeat containing 6. (4851 aa)
trip12Thyroid hormone receptor interactor 12. (2038 aa)
ubl7Ubiquitin-like 7b (bone marrow stromal cell-derived). (379 aa)
mysm1Myb-like, SWIRM and MPN domains 1. (843 aa)
c1qtnf12C1q and TNF related 12. (320 aa)
uba6Ubiquitin like modifier activating enzyme 6. (1025 aa)
rnf4Ring finger protein 4. (191 aa)
UBA3E2_bind domain-containing protein. (444 aa)
LOC102220506Ubiquitin-like modifier activating enzyme 7; Belongs to the ubiquitin-activating E1 family. (1012 aa)
LOC102229941UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (206 aa)
rnf8E3 ubiquitin-protein ligase RNF8; E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53 [...] (473 aa)
LOC102233395Ubiquitin-conjugating enzyme E2E 2; Belongs to the ubiquitin-conjugating enzyme family. (201 aa)
ube2mUbiquitin conjugating enzyme E2 M; Belongs to the ubiquitin-conjugating enzyme family. (172 aa)
nae1NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-NAE1 E1 enzyme. E1 activates NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a NEDD8-UBA3 thioester and free AMP. E1 finally transfers NEDD8 to the catalytic cysteine of UBE2M. Belongs to the ubiquitin-activating E1 family. ULA1 subfamily. (532 aa)
Ube2v2Ubiquitin-conjugating enzyme E2 variant 2. (181 aa)
LOC102220928UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (238 aa)
LOC102225848Uncharacterized protein. (155 aa)
LOC102229617Ubiquitin-like domain-containing protein. (83 aa)
shprhSNF2 histone linker PHD RING helicase. (1689 aa)
ube2j2Ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog, yeast). (261 aa)
rad18RAD18 E3 ubiquitin protein ligase. (497 aa)
mib2Mindbomb E3 ubiquitin protein ligase 2. (1027 aa)
UBE2HUBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (183 aa)
ube2g1Ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family. (170 aa)
ube2nUbiquitin-conjugating enzyme E2Na; Belongs to the ubiquitin-conjugating enzyme family. (184 aa)
LOC102228788Si:ch73-335l21.4. (173 aa)
ube2hUbiquitin-conjugating enzyme E2H (UBC8 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family. (183 aa)
ube2kUbiquitin-conjugating enzyme E2Kb (UBC1 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family. (200 aa)
LOC102233854Ubiquitin-conjugating enzyme E2D 4 (putative); Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
ube2e1Ubiquitin-conjugating enzyme E2E 1; Belongs to the ubiquitin-conjugating enzyme family. (196 aa)
LOC102225181Lysine (K)-specific demethylase 6B, a. (2105 aa)
LOC102222270UBIQUITIN_CONJUGAT_2 domain-containing protein. (197 aa)
ENSXMAP00000036141Ubiquitin-like domain-containing protein. (75 aa)
LOC102228562Cell division cycle 34 homolog (S. cerevisiae) a; Belongs to the ubiquitin-conjugating enzyme family. (241 aa)
LOC102229303Ubiquitin conjugating enzyme E2 K; Belongs to the ubiquitin-conjugating enzyme family. (200 aa)
LOC102226945Ubiquitin-conjugating enzyme E2D 3; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
LOC102221826UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (210 aa)
fau40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (199 aa)
ube2v1Ubiquitin-conjugating enzyme E2 variant 1. (147 aa)
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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