11 items (Xiphophorus maculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	e2f4	E2F transcription factor 4. (389 aa)
	ccna2	Cyclin A2; Belongs to the cyclin family. (432 aa)
	cdk2	Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily. (298 aa)
	e2f1	E2F transcription factor 1. (456 aa)
	LOC102225329	Retinoblastoma-like 2 (p130). (1063 aa)
	tfdp1	Transcription factor. (410 aa)
	e2f2	Si:ch211-160f23.5. (472 aa)
	rbl1	Retinoblastoma-like 1 (p107). (1055 aa)
	rb1	Retinoblastoma susceptibility protein. (912 aa)
	ENSXMAP00000036885	E2F_TDP domain-containing protein. (102 aa)
	ENSXMAP00000041178	E2F transcription factor 5. (149 aa)

Your Current Organism:

Xiphophorus maculatus

NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSXMAP00000036885	ENSXMAP00000041178	ENSXMAP00000036885	ENSXMAP00000041178	E2F_TDP domain-containing protein.	E2F transcription factor 5.	0.604
ENSXMAP00000036885	LOC102225329	ENSXMAP00000036885	ENSXMAP00000004694	E2F_TDP domain-containing protein.	Retinoblastoma-like 2 (p130).	0.979
ENSXMAP00000036885	ccna2	ENSXMAP00000036885	ENSXMAP00000002060	E2F_TDP domain-containing protein.	Cyclin A2; Belongs to the cyclin family.	0.965
ENSXMAP00000036885	cdk2	ENSXMAP00000036885	ENSXMAP00000003340	E2F_TDP domain-containing protein.	Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily.	0.942
ENSXMAP00000036885	e2f1	ENSXMAP00000036885	ENSXMAP00000004680	E2F_TDP domain-containing protein.	E2F transcription factor 1.	0.623
ENSXMAP00000036885	e2f4	ENSXMAP00000036885	ENSXMAP00000001972	E2F_TDP domain-containing protein.	E2F transcription factor 4.	0.587
ENSXMAP00000036885	rb1	ENSXMAP00000036885	ENSXMAP00000030748	E2F_TDP domain-containing protein.	Retinoblastoma susceptibility protein.	0.982
ENSXMAP00000036885	rbl1	ENSXMAP00000036885	ENSXMAP00000014637	E2F_TDP domain-containing protein.	Retinoblastoma-like 1 (p107).	0.979
ENSXMAP00000036885	tfdp1	ENSXMAP00000036885	ENSXMAP00000011702	E2F_TDP domain-containing protein.	Transcription factor.	0.976
ENSXMAP00000041178	ENSXMAP00000036885	ENSXMAP00000041178	ENSXMAP00000036885	E2F transcription factor 5.	E2F_TDP domain-containing protein.	0.604
ENSXMAP00000041178	LOC102225329	ENSXMAP00000041178	ENSXMAP00000004694	E2F transcription factor 5.	Retinoblastoma-like 2 (p130).	0.984
ENSXMAP00000041178	ccna2	ENSXMAP00000041178	ENSXMAP00000002060	E2F transcription factor 5.	Cyclin A2; Belongs to the cyclin family.	0.663
ENSXMAP00000041178	cdk2	ENSXMAP00000041178	ENSXMAP00000003340	E2F transcription factor 5.	Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily.	0.557
ENSXMAP00000041178	e2f1	ENSXMAP00000041178	ENSXMAP00000004680	E2F transcription factor 5.	E2F transcription factor 1.	0.454
ENSXMAP00000041178	e2f2	ENSXMAP00000041178	ENSXMAP00000012593	E2F transcription factor 5.	Si:ch211-160f23.5.	0.586
ENSXMAP00000041178	e2f4	ENSXMAP00000041178	ENSXMAP00000001972	E2F transcription factor 5.	E2F transcription factor 4.	0.902
ENSXMAP00000041178	rb1	ENSXMAP00000041178	ENSXMAP00000030748	E2F transcription factor 5.	Retinoblastoma susceptibility protein.	0.984
ENSXMAP00000041178	rbl1	ENSXMAP00000041178	ENSXMAP00000014637	E2F transcription factor 5.	Retinoblastoma-like 1 (p107).	0.984
ENSXMAP00000041178	tfdp1	ENSXMAP00000041178	ENSXMAP00000011702	E2F transcription factor 5.	Transcription factor.	0.985
LOC102225329	ENSXMAP00000036885	ENSXMAP00000004694	ENSXMAP00000036885	Retinoblastoma-like 2 (p130).	E2F_TDP domain-containing protein.	0.979