24 items (Xiphophorus maculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102223598	Uncharacterized protein. (685 aa)
	LOC102235592	E1A binding protein p300 b. (2751 aa)
	LOC102221046	Citron rho-interacting serine/threonine kinase b. (1590 aa)
	ENSXMAP00000041622	Uncharacterized protein; Belongs to the protein kinase superfamily. (385 aa)
	LOC102230576	CREB binding protein b. (2446 aa)
	LOC102228719	Mothers against decapentaplegic homolog. (503 aa)
	LOC102226082	E1A binding protein p300 a. (2737 aa)
	LOC102226584	Vestigial like 4 like. (269 aa)
	LOC102221224	Vestigial-like family member 4a. (248 aa)
	LOC102221896	Citron rho-interacting serine/threonine kinase a. (1581 aa)
	zbtb49	Zinc finger and BTB domain containing 49. (816 aa)
	LOC102225323	Mothers against decapentaplegic homolog. (563 aa)
	LOC102221134	CREB binding protein a. (2460 aa)
	GATA2	GATA binding protein 2. (466 aa)
	vgll4	Vestigial-like family member 4b. (309 aa)
	med1	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1745 aa)
	ppard	Peroxisome proliferator-activated receptor delta b. (508 aa)
	LOC111610813	Uncharacterized protein. (984 aa)
	LOC102221305	GATA binding protein 1a. (438 aa)
	SMAD4	Mothers against decapentaplegic homolog. (512 aa)
	med25	Mediator complex subunit 25. (790 aa)
	LOC102235646	GATA binding protein 2a. (459 aa)
	ar	Androgen receptor. (754 aa)
	LOC102223432	Uncharacterized protein. (309 aa)

Your Current Organism:

Xiphophorus maculatus

NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSXMAP00000041622	LOC102221046	ENSXMAP00000041622	ENSXMAP00000004094	Uncharacterized protein; Belongs to the protein kinase superfamily.	Citron rho-interacting serine/threonine kinase b.	0.697
ENSXMAP00000041622	LOC102221896	ENSXMAP00000041622	ENSXMAP00000018369	Uncharacterized protein; Belongs to the protein kinase superfamily.	Citron rho-interacting serine/threonine kinase a.	0.729
GATA2	LOC102221134	ENSXMAP00000023077	ENSXMAP00000021600	GATA binding protein 2.	CREB binding protein a.	0.554
GATA2	LOC102221305	ENSXMAP00000023077	ENSXMAP00000030154	GATA binding protein 2.	GATA binding protein 1a.	0.403
GATA2	LOC102223432	ENSXMAP00000023077	ENSXMAP00000038857	GATA binding protein 2.	Uncharacterized protein.	0.400
GATA2	LOC102226082	ENSXMAP00000023077	ENSXMAP00000009770	GATA binding protein 2.	E1A binding protein p300 a.	0.607
GATA2	LOC102230576	ENSXMAP00000023077	ENSXMAP00000004610	GATA binding protein 2.	CREB binding protein b.	0.554
GATA2	LOC102235592	ENSXMAP00000023077	ENSXMAP00000003713	GATA binding protein 2.	E1A binding protein p300 b.	0.607
LOC102221046	ENSXMAP00000041622	ENSXMAP00000004094	ENSXMAP00000041622	Citron rho-interacting serine/threonine kinase b.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.697
LOC102221134	GATA2	ENSXMAP00000021600	ENSXMAP00000023077	CREB binding protein a.	GATA binding protein 2.	0.554
LOC102221134	LOC102221305	ENSXMAP00000021600	ENSXMAP00000030154	CREB binding protein a.	GATA binding protein 1a.	0.553
LOC102221134	LOC102223432	ENSXMAP00000021600	ENSXMAP00000038857	CREB binding protein a.	Uncharacterized protein.	0.553
LOC102221134	LOC102223598	ENSXMAP00000021600	ENSXMAP00000002905	CREB binding protein a.	Uncharacterized protein.	0.602
LOC102221134	LOC102225323	ENSXMAP00000021600	ENSXMAP00000021000	CREB binding protein a.	Mothers against decapentaplegic homolog.	0.515
LOC102221134	LOC102226082	ENSXMAP00000021600	ENSXMAP00000009770	CREB binding protein a.	E1A binding protein p300 a.	0.992
LOC102221134	LOC102228719	ENSXMAP00000021600	ENSXMAP00000005074	CREB binding protein a.	Mothers against decapentaplegic homolog.	0.515
LOC102221134	LOC102230576	ENSXMAP00000021600	ENSXMAP00000004610	CREB binding protein a.	CREB binding protein b.	0.901
LOC102221134	LOC102235592	ENSXMAP00000021600	ENSXMAP00000003713	CREB binding protein a.	E1A binding protein p300 b.	0.992
LOC102221134	LOC102235646	ENSXMAP00000021600	ENSXMAP00000034064	CREB binding protein a.	GATA binding protein 2a.	0.554
LOC102221134	SMAD4	ENSXMAP00000021600	ENSXMAP00000031130	CREB binding protein a.	Mothers against decapentaplegic homolog.	0.515