39 items (Xiphophorus maculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	sh2b3	SH2B adaptor protein 3. (708 aa)
	LOC102225223	Uncharacterized protein. (948 aa)
	nr1h4	Nuclear receptor subfamily 1, group H, member 4. (485 aa)
	LOC102225266	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (159 aa)
	OTOP1	Otopetrin 1. (582 aa)
	traip	TRAF-interacting protein. (448 aa)
	PTPRC	Protein tyrosine phosphatase receptor type C. (1325 aa)
	LOC102233658	Cylindromatosis (turban tumor syndrome), like; Belongs to the peptidase C19 family. (766 aa)
	rabgef1	RAB guanine nucleotide exchange factor (GEF) 1. (474 aa)
	ecm1	Uncharacterized protein. (473 aa)
	LOC102217501	Poly [ADP-ribose] polymerase. (1803 aa)
	LOC102218487	HD domain-containing protein. (473 aa)
	samhd1	SAM domain and HD domain 1. (627 aa)
	il6st	Uncharacterized protein. (885 aa)
	rnf113a	Ring finger protein 113A. (322 aa)
	LOC102231502	Cylindromatosis (turban tumor syndrome), b. (712 aa)
	ythdf3	YTH N(6)-methyladenosine RNA binding protein 3. (603 aa)
	LOC106699956	Uncharacterized protein. (383 aa)
	adar	Adenosine deaminase RNA specific. (1359 aa)
	mul1	Mitochondrial E3 ubiquitin protein ligase 1b. (352 aa)
	M4AE11_XIPMA	Nuclear receptor subfamily 1, group H, member 5. (494 aa)
	LOC102237454	RAB guanine nucleotide exchange factor (GEF) 1, like. (510 aa)
	ythdf2	YTH N(6)-methyladenosine RNA binding protein 2. (638 aa)
	il1r2	Interleukin 1 receptor type 2. (420 aa)
	gas6	Uncharacterized protein. (650 aa)
	mettl3	Methyltransferase like 3; Belongs to the MT-A70-like family. (584 aa)
	ccdc3	Coiled-coil domain containing 3a. (297 aa)
	ENSXMAP00000025020	Uncharacterized protein. (125 aa)
	cav1	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (180 aa)
	LOC102221531	Poly [ADP-ribose] polymerase. (1801 aa)
	pias4	Protein inhibitor of activated STAT, 4a. (507 aa)
	LOC102218487-2	Uncharacterized protein. (422 aa)
	otud4	OTU domain-containing protein. (1243 aa)
	sigirr	Single immunoglobulin and toll-interleukin 1 receptor (TIR) domain. (518 aa)
	ttll12	Tubulin tyrosine ligase-like family, member 12. (627 aa)
	cyld	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family. (952 aa)
	LOC102230552	Coiled-coil domain containing 3b. (289 aa)
	LOC102237766	Poly [ADP-ribose] polymerase. (1776 aa)
	dcst1	DC-STAMP domain containing 1. (639 aa)

Your Current Organism:

Xiphophorus maculatus

NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102237454	rabgef1	ENSXMAP00000018513	ENSXMAP00000006656	RAB guanine nucleotide exchange factor (GEF) 1, like.	RAB guanine nucleotide exchange factor (GEF) 1.	0.575
adar	cav1	ENSXMAP00000010587	ENSXMAP00000025385	Adenosine deaminase RNA specific.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.487
cav1	adar	ENSXMAP00000025385	ENSXMAP00000010587	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Adenosine deaminase RNA specific.	0.487
mettl3	ythdf2	ENSXMAP00000021891	ENSXMAP00000018804	Methyltransferase like 3; Belongs to the MT-A70-like family.	YTH N(6)-methyladenosine RNA binding protein 2.	0.576
mettl3	ythdf3	ENSXMAP00000021891	ENSXMAP00000009718	Methyltransferase like 3; Belongs to the MT-A70-like family.	YTH N(6)-methyladenosine RNA binding protein 3.	0.487
rabgef1	LOC102237454	ENSXMAP00000006656	ENSXMAP00000018513	RAB guanine nucleotide exchange factor (GEF) 1.	RAB guanine nucleotide exchange factor (GEF) 1, like.	0.575
ythdf2	mettl3	ENSXMAP00000018804	ENSXMAP00000021891	YTH N(6)-methyladenosine RNA binding protein 2.	Methyltransferase like 3; Belongs to the MT-A70-like family.	0.576
ythdf3	mettl3	ENSXMAP00000009718	ENSXMAP00000021891	YTH N(6)-methyladenosine RNA binding protein 3.	Methyltransferase like 3; Belongs to the MT-A70-like family.	0.487