STRINGSTRING
efna1 efna1 LOC102226959 LOC102226959 LOC102231173 LOC102231173 LOC102228719 LOC102228719 slc2a12 slc2a12 LOC102216648 LOC102216648 Mtor Mtor cemip2 cemip2 LOC102216881 LOC102216881 LOC102225057 LOC102225057 rb1 rb1 LOC102231514 LOC102231514 krit1 krit1 LOC102225323 LOC102225323 M4AUE5_XIPMA M4AUE5_XIPMA LOC102226889 LOC102226889 TGFBR2 TGFBR2 hace1 hace1 SMAD4 SMAD4 LOC102238282 LOC102238282 bmpr2 bmpr2 LOC102230588 LOC102230588 ccn1 ccn1 LOC102223224 LOC102223224 pdlim7 pdlim7 rad21 rad21 LOC102226954 LOC102226954
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
efna1Ephrin-A1b; Belongs to the ephrin family. (232 aa)
LOC102226959Elastin microfibril interfacer 1b. (1121 aa)
LOC102231173T-box transcription factor 5a. (516 aa)
LOC102228719Mothers against decapentaplegic homolog. (503 aa)
slc2a12Solute carrier family 2 member 12; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (579 aa)
LOC102216648Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (379 aa)
MtorSerine/threonine-protein kinase TOR. (1011 aa)
cemip2Cell migration inducing hyaluronidase 2. (1389 aa)
LOC102216881Transforming growth factor beta; Belongs to the TGF-beta family. (394 aa)
LOC102225057Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (403 aa)
rb1Retinoblastoma susceptibility protein. (912 aa)
LOC102231514Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (598 aa)
krit1KRIT1 ankyrin repeat containing. (739 aa)
LOC102225323Mothers against decapentaplegic homolog. (563 aa)
M4AUE5_XIPMARad21_Rec8_N domain-containing protein. (125 aa)
LOC102226889Ephrin-A1a; Belongs to the ephrin family. (222 aa)
TGFBR2Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (539 aa)
hace1HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1. (895 aa)
SMAD4Mothers against decapentaplegic homolog. (512 aa)
LOC102238282RAD21 cohesin complex component b. (642 aa)
bmpr2Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (988 aa)
LOC102230588Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1144 aa)
ccn1Cellular communication network factor 1. (376 aa)
LOC102223224Uncharacterized protein. (643 aa)
pdlim7PDZ and LIM domain 7. (453 aa)
rad21RAD21 cohesin complex component a. (637 aa)
LOC102226954Elastin microfibril interfacer 1a. (1024 aa)
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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