46 items (Xiphophorus maculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	mras	Muscle RAS oncogene homolog. (208 aa)
	LOC102232710	Uncharacterized protein. (218 aa)
	LOC102236184	Zgc:171927. (214 aa)
	LOC102231865	Uncharacterized protein. (203 aa)
	LOC102235995	RAP1A, member of RAS oncogene family b. (185 aa)
	LOC102223832	Uncharacterized protein. (184 aa)
	LOC102236058	Uncharacterized protein. (191 aa)
	LOC102232995	Zgc:55558. (187 aa)
	rasl11b	RAS-like, family 11, member B. (244 aa)
	LOC102218920	Uncharacterized protein. (202 aa)
	M4AYI0_XIPMA	ADP-ribosylation factor 6b; Belongs to the small GTPase superfamily. Arf family. (184 aa)
	RAP2B	RAP2B, member of RAS oncogene family. (187 aa)
	M4B0Z3_XIPMA	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (151 aa)
	LOC102223132	Uncharacterized protein. (191 aa)
	rasl12	RAS-like, family 12. (245 aa)
	LOC102226410	V-ral simian leukemia viral oncogene homolog Aa (ras related). (206 aa)
	LOC102219790	RAB7a, member RAS oncogene family. (207 aa)
	LOC102223553	Zgc:171704. (211 aa)
	rab5c	RAB5C, member RAS oncogene family. (220 aa)
	LOC102226994	Uncharacterized protein. (185 aa)
	RAP2A	RAP2A, member of RAS oncogene family. (183 aa)
	LOC102226911	RAB11a, member RAS oncogene family, like. (216 aa)
	LOC102221989	RAB5A, member RAS oncogene family, a. (216 aa)
	rerg	RAS like estrogen regulated growth inhibitor. (200 aa)
	rab11a	RAB11a, member RAS oncogene family. (262 aa)
	LOC102221575	RAB4B, member RAS oncogene family. (239 aa)
	CDC42	Cell division cycle 42. (191 aa)
	rap2c	RAP2C, member of RAS oncogene family. (183 aa)
	LOC102226126	Si:dkeyp-59c12.1. (199 aa)
	rasl11a	RAS-like, family 11, member A. (255 aa)
	LOC102232228	V-ral simian leukemia viral oncogene homolog Ba (ras related). (207 aa)
	LOC102231109	Uncharacterized protein. (223 aa)
	LOC102230535	Uncharacterized protein. (207 aa)
	KRAS	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog. (189 aa)
	rab4a	RAB4a, member RAS oncogene family. (213 aa)
	LOC102226130	Cell division cycle 42. (191 aa)
	rergl	RERG/RAS-like b. (206 aa)
	LOC102236106	Uncharacterized protein. (312 aa)
	LOC102233132	RAB5A, member RAS oncogene family, b. (216 aa)
	LOC102236931	ZRAB1B, member RAS oncogene family a. (201 aa)
	rab27a	RAB27A, member RAS oncogene family. (220 aa)
	LOC102218510	RAB11B, member RAS oncogene family, b. (218 aa)
	LOC102236307	Uncharacterized protein. (218 aa)
	LOC102219022	RAB11B, member RAS oncogene family, a. (249 aa)
	LOC102229808	RAB27B, member RAS oncogene family. (218 aa)
	LOC102224939	RAB5B, member RAS oncogene family. (216 aa)

Your Current Organism:

Xiphophorus maculatus

NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC42	LOC102219790	ENSXMAP00000030991	ENSXMAP00000022705	Cell division cycle 42.	RAB7a, member RAS oncogene family.	0.509
CDC42	LOC102230535	ENSXMAP00000030991	ENSXMAP00000033151	Cell division cycle 42.	Uncharacterized protein.	0.509
KRAS	LOC102223832	ENSXMAP00000033363	ENSXMAP00000006551	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.	Uncharacterized protein.	0.421
KRAS	LOC102226994	ENSXMAP00000033363	ENSXMAP00000026714	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.	Uncharacterized protein.	0.420
KRAS	LOC102235995	ENSXMAP00000033363	ENSXMAP00000006006	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.	RAP1A, member of RAS oncogene family b.	0.420
LOC102218510	LOC102218920	ENSXMAP00000039862	ENSXMAP00000015808	RAB11B, member RAS oncogene family, b.	Uncharacterized protein.	0.558
LOC102218510	LOC102219790	ENSXMAP00000039862	ENSXMAP00000022705	RAB11B, member RAS oncogene family, b.	RAB7a, member RAS oncogene family.	0.449
LOC102218510	LOC102221989	ENSXMAP00000039862	ENSXMAP00000028154	RAB11B, member RAS oncogene family, b.	RAB5A, member RAS oncogene family, a.	0.422
LOC102218510	LOC102224939	ENSXMAP00000039862	ENSXMAP00000041232	RAB11B, member RAS oncogene family, b.	RAB5B, member RAS oncogene family.	0.422
LOC102218510	LOC102230535	ENSXMAP00000039862	ENSXMAP00000033151	RAB11B, member RAS oncogene family, b.	Uncharacterized protein.	0.450
LOC102218510	LOC102231109	ENSXMAP00000039862	ENSXMAP00000033116	RAB11B, member RAS oncogene family, b.	Uncharacterized protein.	0.422
LOC102218510	LOC102231865	ENSXMAP00000039862	ENSXMAP00000005770	RAB11B, member RAS oncogene family, b.	Uncharacterized protein.	0.558
LOC102218510	LOC102233132	ENSXMAP00000039862	ENSXMAP00000037209	RAB11B, member RAS oncogene family, b.	RAB5A, member RAS oncogene family, b.	0.423
LOC102218510	LOC102236184	ENSXMAP00000039862	ENSXMAP00000004695	RAB11B, member RAS oncogene family, b.	Zgc:171927.	0.562
LOC102218510	LOC102236931	ENSXMAP00000039862	ENSXMAP00000037874	RAB11B, member RAS oncogene family, b.	ZRAB1B, member RAS oncogene family a.	0.558
LOC102218510	rab5c	ENSXMAP00000039862	ENSXMAP00000026591	RAB11B, member RAS oncogene family, b.	RAB5C, member RAS oncogene family.	0.422
LOC102218920	LOC102218510	ENSXMAP00000015808	ENSXMAP00000039862	Uncharacterized protein.	RAB11B, member RAS oncogene family, b.	0.558
LOC102218920	LOC102219022	ENSXMAP00000015808	ENSXMAP00000040583	Uncharacterized protein.	RAB11B, member RAS oncogene family, a.	0.559
LOC102218920	LOC102219790	ENSXMAP00000015808	ENSXMAP00000022705	Uncharacterized protein.	RAB7a, member RAS oncogene family.	0.405
LOC102218920	LOC102226911	ENSXMAP00000015808	ENSXMAP00000028105	Uncharacterized protein.	RAB11a, member RAS oncogene family, like.	0.557