STRINGSTRING
sema6d sema6d LOC102230127 LOC102230127 sema6a sema6a med13 med13 med12 med12 LOC106699846 LOC106699846 fgf3 fgf3 fgf19 fgf19 LOC102231505 LOC102231505 LOC102230011 LOC102230011 LOC102235215 LOC102235215 leo1 leo1 sema4c sema4c tbx1 tbx1 LOC102218264 LOC102218264 LOC102233200 LOC102233200 sema3d sema3d LOC102236687 LOC102236687 sema3e sema3e rax rax LOC102222598 LOC102222598 rcc2 rcc2 cep41 cep41 LOC102228719 LOC102228719 dlx2 dlx2 nusap1 nusap1 LOC102235692 LOC102235692 wdr11 wdr11 M3ZYL6_XIPMA M3ZYL6_XIPMA tapt1 tapt1 nrp1 nrp1 LOC102236619 LOC102236619 pdgfrb pdgfrb ednra ednra colec10 colec10 anxa6 anxa6 LOC102228256 LOC102228256 LOC102233681 LOC102233681 smo smo KLHL12 KLHL12 LOC102219562 LOC102219562 sema6b sema6b LOC102231237 LOC102231237 ret ret dicer1 dicer1 M4ANE6_XIPMA M4ANE6_XIPMA edn1 edn1 KCTD15 KCTD15 CDH2 CDH2 LOC102227841 LOC102227841 LOC102230049 LOC102230049 sema4g sema4g LOC102226307 LOC102226307 LOC102237426 LOC102237426 LOC102220143 LOC102220143 sema3g sema3g LOC102237592 LOC102237592 LOC102224004 LOC102224004 LOC102225323 LOC102225323 LOC111612253 LOC111612253 LOC102235196 LOC102235196 LOC102221365 LOC102221365 LOC102220119 LOC102220119 LOC102219505 LOC102219505 LOC102225447 LOC102225447 pef1 pef1 sema5b sema5b LOC102238385 LOC102238385 sox10 sox10 ENSXMAP00000025806 ENSXMAP00000025806 Fbxl17 Fbxl17 LOC102218412 LOC102218412 LOC102218775 LOC102218775 phox2b phox2b LOC102227535 LOC102227535 EDNRA EDNRA radil radil sema7a sema7a LOC102227927 LOC102227927 wtip wtip gdnf gdnf colec11 colec11 KCTD15-2 KCTD15-2 kbtbd8 kbtbd8 LOC102232353 LOC102232353 LOC102234533 LOC102234533 LOC102221546 LOC102221546 pdcd6 pdcd6 LOC102224827 LOC102224827 alx1 alx1 sema3c sema3c LOC102228510 LOC102228510 LOC102226621 LOC102226621 LOC102221607 LOC102221607 sh3pxd2a sh3pxd2a SEMA4D SEMA4D sema3a sema3a nolc1 nolc1 htr2b htr2b LOC102237989 LOC102237989 LOC102222696 LOC102222696 sema3b sema3b ENSXMAP00000035024 ENSXMAP00000035024 ENSXMAP00000034571 ENSXMAP00000034571 FOXC1 FOXC1 SEMA4F SEMA4F sema5a sema5a LOC102226870 LOC102226870 gbx2 gbx2 SMAD4 SMAD4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sema6dSema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like; Belongs to the semaphorin family. (1109 aa)
LOC102230127Uncharacterized protein. (254 aa)
sema6aSemaphorin 6A; Belongs to the semaphorin family. (1016 aa)
med13Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (2151 aa)
med12Mediator complex subunit 12. (2014 aa)
LOC106699846Neurturin. (230 aa)
fgf3Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (248 aa)
fgf19Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (207 aa)
LOC102231505Activated leukocyte cell adhesion molecule b. (560 aa)
LOC102230011Fibronectin 1a. (2488 aa)
LOC102235215Neuropilin 2b. (1026 aa)
leo1LEO1 homolog, Paf1/RNA polymerase II complex component. (632 aa)
sema4cUncharacterized protein; Belongs to the semaphorin family. (861 aa)
tbx1T-box transcription factor 1. (498 aa)
LOC102218264Sema domain-containing protein; Belongs to the semaphorin family. (834 aa)
LOC102233200Si:ch211-176g6.2. (1248 aa)
sema3dSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D; Belongs to the semaphorin family. (804 aa)
LOC102236687Sema domain-containing protein. (1092 aa)
sema3eSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E; Belongs to the semaphorin family. (794 aa)
raxRetinal homeobox gene 3. (309 aa)
LOC102222598Endothelin receptor type Bb; Belongs to the G-protein coupled receptor 1 family. (469 aa)
rcc2Regulator of chromosome condensation 2. (494 aa)
cep41Centrosomal protein 41. (368 aa)
LOC102228719Mothers against decapentaplegic homolog. (503 aa)
dlx2Distal-less homeobox 2b. (277 aa)
nusap1Nucleolar and spindle associated protein 1. (441 aa)
LOC102235692Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (909 aa)
wdr11WD repeat domain 11. (1240 aa)
M3ZYL6_XIPMASema domain-containing protein; Belongs to the semaphorin family. (514 aa)
tapt1Transmembrane anterior posterior transformation 1b. (572 aa)
nrp1Neuropilin; Belongs to the neuropilin family. (925 aa)
LOC102236619Sema domain-containing protein; Belongs to the semaphorin family. (820 aa)
pdgfrbPlatelet-derived growth factor receptor, beta polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1102 aa)
ednraEndothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family. (444 aa)
colec10Collectin subfamily member 10. (280 aa)
anxa6Annexin. (666 aa)
LOC102228256Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (350 aa)
LOC102233681Si:dkey-49n23.1; Belongs to the semaphorin family. (791 aa)
smoSmoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. (811 aa)
KLHL12Kelch like family member 12. (598 aa)
LOC102219562SRY-box transcription factor 9b. (478 aa)
sema6bSema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Bb; Belongs to the semaphorin family. (870 aa)
LOC102231237Si:ch211-113g11.6; Belongs to the semaphorin family. (641 aa)
retProto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands. (1119 aa)
dicer1Dicer 1, ribonuclease type III; Belongs to the helicase family. Dicer subfamily. (1860 aa)
M4ANE6_XIPMAF-box and leucine-rich repeat protein 17. (294 aa)
edn1Endothelin 1. (197 aa)
KCTD15Potassium channel tetramerization domain containing 15. (265 aa)
CDH2Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins. (906 aa)
LOC102227841Phosphatase and actin regulator. (587 aa)
LOC102230049G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (420 aa)
sema4gUncharacterized protein; Belongs to the semaphorin family. (844 aa)
LOC102226307BTB domain-containing protein. (514 aa)
LOC102237426Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E; Belongs to the semaphorin family. (1086 aa)
LOC102220143Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Ba; Belongs to the semaphorin family. (899 aa)
sema3gSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl; Belongs to the semaphorin family. (784 aa)
LOC102237592Semaphorin 4e; Belongs to the semaphorin family. (834 aa)
LOC102224004Sema domain-containing protein; Belongs to the semaphorin family. (837 aa)
LOC102225323Mothers against decapentaplegic homolog. (563 aa)
LOC111612253Sema domain-containing protein; Belongs to the semaphorin family. (683 aa)
LOC102235196Forkhead box Q2. (290 aa)
LOC102221365HMG box domain-containing protein. (502 aa)
LOC102220119Uncharacterized protein; Belongs to the semaphorin family. (788 aa)
LOC102219505SRY-box transcription factor 9a. (495 aa)
LOC102225447Uncharacterized protein; Belongs to the semaphorin family. (880 aa)
pef1Penta-EF-hand domain containing 1. (277 aa)
sema5bSema domain-containing protein. (1107 aa)
LOC102238385Transmembrane anterior posterior transformation 1a. (603 aa)
sox10SRY-box transcription factor 10. (473 aa)
ENSXMAP00000025806Sema domain-containing protein; Belongs to the semaphorin family. (746 aa)
Fbxl17Uncharacterized protein. (215 aa)
LOC102218412Coronin; Belongs to the WD repeat coronin family. (1163 aa)
LOC102218775Phosphatase and actin regulator. (879 aa)
phox2bPaired like homeobox 2Bb. (285 aa)
LOC102227535Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Aa; Belongs to the semaphorin family. (856 aa)
EDNRAEndothelin receptor type A; Belongs to the G-protein coupled receptor 1 family. (475 aa)
radilRas association and DIL domains. (1189 aa)
sema7aSemaphorin 7A; Belongs to the semaphorin family. (652 aa)
LOC102227927SH3 and PX domains 2Aa. (1178 aa)
wtipWT1 interacting protein. (710 aa)
gdnfGlial cell line-derived neurotrophic factor; Neurotrophic factor that enhances survival and morphological differentiation of dopaminergic neurons and increases their high- affinity dopamine uptake. (254 aa)
colec11Collectin sub-family member 11. (274 aa)
KCTD15-2Potassium channel tetramerization domain containing 15. (295 aa)
kbtbd8Kelch repeat and BTB (POZ) domain containing 8. (604 aa)
LOC102232353Phosphatase and actin regulator. (632 aa)
LOC102234533Sema domain-containing protein; Belongs to the semaphorin family. (1174 aa)
LOC102221546Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family. (820 aa)
pdcd6Programmed cell death 6. (185 aa)
LOC102224827Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (2107 aa)
alx1ALX homeobox 1. (324 aa)
sema3cSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C; Belongs to the semaphorin family. (748 aa)
LOC102228510Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (345 aa)
LOC102226621Si:ch211-129c21.1; Belongs to the semaphorin family. (798 aa)
LOC102221607Phosphatase and actin regulator 4a. (1164 aa)
sh3pxd2aUncharacterized protein. (1060 aa)
SEMA4DSemaphorin 4D; Belongs to the semaphorin family. (908 aa)
sema3aSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab; Belongs to the semaphorin family. (804 aa)
nolc1Nucleolar and coiled-body phosphoprotein 1. (1181 aa)
htr2b5-hydroxytryptamine (serotonin) receptor 2B, G protein-coupled. (466 aa)
LOC102237989Forkhead box C1. (472 aa)
LOC102222696Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb; Belongs to the semaphorin family. (814 aa)
sema3bSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B; Belongs to the semaphorin family. (809 aa)
ENSXMAP00000035024Uncharacterized protein. (322 aa)
ENSXMAP00000034571Sema domain-containing protein; Belongs to the semaphorin family. (688 aa)
FOXC1Forkhead box C1. (221 aa)
SEMA4FSsemaphorin 4F; Belongs to the semaphorin family. (843 aa)
sema5aSema domain-containing protein. (1078 aa)
LOC102226870Endothelin receptor Ba; Belongs to the G-protein coupled receptor 1 family. (417 aa)
gbx2Gastrulation brain homeobox 2. (350 aa)
SMAD4Mothers against decapentaplegic homolog. (512 aa)
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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