27 items (Xiphophorus maculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	igf1	Insulin-like growth factor 1. (186 aa)
	mymk	Myomaker, myoblast fusion factor. (238 aa)
	lmcd1	LIM and cysteine-rich domains 1. (356 aa)
	errfi1	ERBB receptor feedback inhibitor 1a. (423 aa)
	LOC102228726	SCP domain-containing protein; Belongs to the CRISP family. (424 aa)
	parp1	Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (1015 aa)
	gsk3b	Glycogen synthase kinase 3 beta, genome duplicate a; Belongs to the protein kinase superfamily. (423 aa)
	LOC102228719	Mothers against decapentaplegic homolog. (503 aa)
	parp2	Poly [ADP-ribose] polymerase. (509 aa)
	ctdp1	RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (905 aa)
	LOC102230261	Insulin-like growth factor binding protein 5a. (268 aa)
	il6st	Uncharacterized protein. (885 aa)
	LOC102229337	Insulin-like growth factor binding protein 5a. (246 aa)
	pde9a	Phosphodiesterase. (518 aa)
	M4AEC3_XIPMA	Si:dkey-219c10.4; Belongs to the cyclic nucleotide phosphodiesterase family. (305 aa)
	tomm70	Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae). (578 aa)
	edn1	Endothelin 1. (197 aa)
	LOC102236245	Glycogen synthase kinase 3 alpha a; Belongs to the protein kinase superfamily. (433 aa)
	LOC102225323	Mothers against decapentaplegic homolog. (563 aa)
	gsk3a	Glycogen synthase kinase 3 alpha b; Belongs to the protein kinase superfamily. (440 aa)
	akap6	A kinase (PRKA) anchor protein 6. (2530 aa)
	SMAD4	Mothers against decapentaplegic homolog. (512 aa)
	LOC102226468	Uncharacterized protein. (453 aa)
	mlip	Uncharacterized protein. (822 aa)
	LOC102232072	Eukaryotic translation initiation factor 4E binding protein 3. (114 aa)
	rusc1	Uncharacterized protein. (1574 aa)
	tnfrsf1a	Tumor necrosis factor receptor superfamily, member 1a. (365 aa)

Your Current Organism:

Xiphophorus maculatus

NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102225323	parp1	ENSXMAP00000021000	ENSXMAP00000003639	Mothers against decapentaplegic homolog.	Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.	0.599
LOC102225323	parp2	ENSXMAP00000021000	ENSXMAP00000005418	Mothers against decapentaplegic homolog.	Poly [ADP-ribose] polymerase.	0.580
LOC102226468	tnfrsf1a	ENSXMAP00000032690	ENSXMAP00000037629	Uncharacterized protein.	Tumor necrosis factor receptor superfamily, member 1a.	0.682
LOC102228719	SMAD4	ENSXMAP00000005074	ENSXMAP00000031130	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.900
LOC102228719	parp1	ENSXMAP00000005074	ENSXMAP00000003639	Mothers against decapentaplegic homolog.	Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.	0.599
LOC102228719	parp2	ENSXMAP00000005074	ENSXMAP00000005418	Mothers against decapentaplegic homolog.	Poly [ADP-ribose] polymerase.	0.580
LOC102229337	igf1	ENSXMAP00000007819	ENSXMAP00000022870	Insulin-like growth factor binding protein 5a.	Insulin-like growth factor 1.	0.945
LOC102230261	igf1	ENSXMAP00000006580	ENSXMAP00000022870	Insulin-like growth factor binding protein 5a.	Insulin-like growth factor 1.	0.945
SMAD4	LOC102228719	ENSXMAP00000031130	ENSXMAP00000005074	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.900
SMAD4	parp1	ENSXMAP00000031130	ENSXMAP00000003639	Mothers against decapentaplegic homolog.	Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.	0.599
SMAD4	parp2	ENSXMAP00000031130	ENSXMAP00000005418	Mothers against decapentaplegic homolog.	Poly [ADP-ribose] polymerase.	0.580
edn1	parp1	ENSXMAP00000016173	ENSXMAP00000003639	Endothelin 1.	Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.	0.403
igf1	LOC102229337	ENSXMAP00000022870	ENSXMAP00000007819	Insulin-like growth factor 1.	Insulin-like growth factor binding protein 5a.	0.945
igf1	LOC102230261	ENSXMAP00000022870	ENSXMAP00000006580	Insulin-like growth factor 1.	Insulin-like growth factor binding protein 5a.	0.945
parp1	LOC102225323	ENSXMAP00000003639	ENSXMAP00000021000	Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.	Mothers against decapentaplegic homolog.	0.599
parp1	LOC102228719	ENSXMAP00000003639	ENSXMAP00000005074	Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.	Mothers against decapentaplegic homolog.	0.599
parp1	SMAD4	ENSXMAP00000003639	ENSXMAP00000031130	Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.	Mothers against decapentaplegic homolog.	0.599
parp1	edn1	ENSXMAP00000003639	ENSXMAP00000016173	Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.	Endothelin 1.	0.403
parp1	parp2	ENSXMAP00000003639	ENSXMAP00000005418	Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.	Poly [ADP-ribose] polymerase.	0.981
parp2	LOC102225323	ENSXMAP00000005418	ENSXMAP00000021000	Poly [ADP-ribose] polymerase.	Mothers against decapentaplegic homolog.	0.580