54 items (Xiphophorus maculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	frmd6	FERM domain containing 6. (607 aa)
	myo1b	Myosin IB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1166 aa)
	LOC102223686	FERM domain-containing protein. (410 aa)
	myo5a	Myosin VAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1816 aa)
	was	WASP actin nucleation promoting factor a. (530 aa)
	LOC102232121	Sodium channel, voltage-gated, type IV, beta b. (227 aa)
	LOC102221109	Ependymin-like 1. (218 aa)
	Myo5b	Dilute domain-containing protein. (474 aa)
	limch1	LIM and calponin homology domains 1b. (1157 aa)
	LOC102224234	Sodium channel, voltage-gated, type I, beta a. (216 aa)
	myo1c	Myosin Ic, paralog b; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1066 aa)
	fnbp1l	Formin binding protein 1-like. (570 aa)
	ENSXMAP00000026645	Uncharacterized protein. (213 aa)
	scn3b	Sodium channel, voltage-gated, type III, beta. (219 aa)
	LOC102217266	Myosin IG; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1010 aa)
	LOC102221167	WASP like actin nucleation promoting factor b. (495 aa)
	LOC102223667	Myosin IHb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1038 aa)
	LOC102219201	Uncharacterized protein; Belongs to the potassium channel family. (742 aa)
	ENSXMAP00000030800	Dilute domain-containing protein. (438 aa)
	LOC102216442	Sodium channel, voltage-gated, type I, beta b. (223 aa)
	ENSXMAP00000031686	Dilute domain-containing protein. (452 aa)
	LOC102221965	Myosin, light chain 6, alkali, smooth muscle and non-muscle. (212 aa)
	wipf3	Sb:cb649. (423 aa)
	LOC102222477	WAS/WASL interacting protein family, member 2b. (426 aa)
	scn2b	Sodium channel, voltage-gated, type II, beta. (219 aa)
	ENSXMAP00000034786	Uncharacterized protein. (134 aa)
	LOC102236939	Uncharacterized protein. (1659 aa)
	myo1e	Myosin IEa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1120 aa)
	LOC102220589	Uncharacterized protein. (214 aa)
	ENSXMAP00000039242	Si:ch211-1o7.3. (430 aa)
	Wipf1	WH2 domain-containing protein. (125 aa)
	LOC102237469	WAS/WASL interacting protein family, member 2a. (413 aa)
	LOC102225469	Myosin Ic, paralog a; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1044 aa)
	kcnq1	Potassium voltage-gated channel, KQT-like subfamily, member 1.1; Belongs to the potassium channel family. (691 aa)
	LOC102220856	Uncharacterized protein. (213 aa)
	scn4b	Sodium channel, voltage-gated, type IV, beta a. (233 aa)
	wasl	WASP like actin nucleation promoting factor a. (482 aa)
	LOC102229691	FERM domain-containing protein. (496 aa)
	kcne4	Potassium voltage-gated channel, Isk-related family, member 4. (228 aa)
	MYO6	Myosin VI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1253 aa)
	LOC102229940	Myosin IHa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (907 aa)
	myo6	Myosin VIa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (955 aa)
	LOC102236767	Uncharacterized protein. (222 aa)
	epdr1	Ependymin related 1. (212 aa)
	Myo5c	Myosin VC; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (713 aa)
	M3ZWZ6_XIPMA	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (592 aa)
	myo19	Myosin XIX; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (960 aa)
	nup155	Nucleoporin 155. (1346 aa)
	LOC102229034	Myosin IEb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1093 aa)
	M3ZM05_XIPMA	Si:dkey-280e21.3. (353 aa)
	LOC102236585	Myosin IF; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1102 aa)
	LOC102236739	Uncharacterized protein. (151 aa)
	shtn1	Shootin 1. (499 aa)
	LOC102218395	Coiled-coil domain containing 88C. (1823 aa)

Your Current Organism:

Xiphophorus maculatus

NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSXMAP00000026645	LOC102221167	ENSXMAP00000026645	ENSXMAP00000029369	Uncharacterized protein.	WASP like actin nucleation promoting factor b.	0.806
ENSXMAP00000026645	LOC102229034	ENSXMAP00000026645	ENSXMAP00000004845	Uncharacterized protein.	Myosin IEb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.482
ENSXMAP00000026645	LOC102236585	ENSXMAP00000026645	ENSXMAP00000002630	Uncharacterized protein.	Myosin IF; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.482
ENSXMAP00000026645	fnbp1l	ENSXMAP00000026645	ENSXMAP00000025992	Uncharacterized protein.	Formin binding protein 1-like.	0.561
ENSXMAP00000026645	myo1e	ENSXMAP00000026645	ENSXMAP00000037934	Uncharacterized protein.	Myosin IEa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.482
ENSXMAP00000026645	was	ENSXMAP00000026645	ENSXMAP00000018455	Uncharacterized protein.	WASP actin nucleation promoting factor a.	0.806
ENSXMAP00000026645	wasl	ENSXMAP00000026645	ENSXMAP00000010719	Uncharacterized protein.	WASP like actin nucleation promoting factor a.	0.806
ENSXMAP00000030800	M3ZWZ6_XIPMA	ENSXMAP00000030800	ENSXMAP00000006740	Dilute domain-containing protein.	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.807
ENSXMAP00000034786	LOC102219201	ENSXMAP00000034786	ENSXMAP00000030623	Uncharacterized protein.	Uncharacterized protein; Belongs to the potassium channel family.	0.979
ENSXMAP00000034786	kcne4	ENSXMAP00000034786	ENSXMAP00000008285	Uncharacterized protein.	Potassium voltage-gated channel, Isk-related family, member 4.	0.479
ENSXMAP00000034786	kcnq1	ENSXMAP00000034786	ENSXMAP00000011784	Uncharacterized protein.	Potassium voltage-gated channel, KQT-like subfamily, member 1.1; Belongs to the potassium channel family.	0.979
ENSXMAP00000034786	scn4b	ENSXMAP00000034786	ENSXMAP00000010761	Uncharacterized protein.	Sodium channel, voltage-gated, type IV, beta a.	0.400
LOC102216442	LOC102232121	ENSXMAP00000031080	ENSXMAP00000020917	Sodium channel, voltage-gated, type I, beta b.	Sodium channel, voltage-gated, type IV, beta b.	0.916
LOC102216442	scn2b	ENSXMAP00000031080	ENSXMAP00000034766	Sodium channel, voltage-gated, type I, beta b.	Sodium channel, voltage-gated, type II, beta.	0.887
LOC102216442	scn3b	ENSXMAP00000031080	ENSXMAP00000028233	Sodium channel, voltage-gated, type I, beta b.	Sodium channel, voltage-gated, type III, beta.	0.481
LOC102216442	scn4b	ENSXMAP00000031080	ENSXMAP00000010761	Sodium channel, voltage-gated, type I, beta b.	Sodium channel, voltage-gated, type IV, beta a.	0.957
LOC102219201	ENSXMAP00000034786	ENSXMAP00000030623	ENSXMAP00000034786	Uncharacterized protein; Belongs to the potassium channel family.	Uncharacterized protein.	0.979
LOC102219201	kcne4	ENSXMAP00000030623	ENSXMAP00000008285	Uncharacterized protein; Belongs to the potassium channel family.	Potassium voltage-gated channel, Isk-related family, member 4.	0.666
LOC102219201	kcnq1	ENSXMAP00000030623	ENSXMAP00000011784	Uncharacterized protein; Belongs to the potassium channel family.	Potassium voltage-gated channel, KQT-like subfamily, member 1.1; Belongs to the potassium channel family.	0.903
LOC102221167	ENSXMAP00000026645	ENSXMAP00000029369	ENSXMAP00000026645	WASP like actin nucleation promoting factor b.	Uncharacterized protein.	0.806