(39 nodes) Secretory granule membrane network (Xiphophorus maculatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	tekt3	Tektin 3. (485 aa)
	slc17a9	Solute carrier family 17 member 9b. (466 aa)
	M4ALT9_XIPMA	Synaptotagmin IXb. (331 aa)
	trip11	Thyroid hormone receptor interactor 11. (1937 aa)
	LOC102223935	Synaptotagmin Vb. (424 aa)
	itpr3	Inositol 1,4,5-trisphosphate receptor, type 3. (2431 aa)
	M4AF24_XIPMA	Uncharacterized protein. (388 aa)
	itpr1	Inositol 1,4,5-trisphosphate receptor, type 1b. (2671 aa)
	LOC102236452	Synaptotagmin IXa. (561 aa)
	LOC102222360	Synaptotagmin Ib. (407 aa)
	LOC102237429	Monooxygenase, DBH-like 1, like. (543 aa)
	VPS13B	Vacuolar protein sorting 13 homolog B. (4058 aa)
	LOC102217419	Inositol 1,4,5-trisphosphate receptor, type 1a. (2694 aa)
	scg3	Secretogranin III. (482 aa)
	dbh	Dopamine beta-hydroxylase (dopamine beta-monooxygenase). (614 aa)
	LOC102225266	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (159 aa)
	itpr2	Inositol 1,4,5-trisphosphate receptor, type 2. (2636 aa)
	tmed2	Transmembrane p24 trafficking protein 2. (207 aa)
	LOC102229676	Vesicle-associated membrane protein 8 (endobrevin). (122 aa)
	ENSXMAP00000039056	V-SNARE coiled-coil homology domain-containing protein. (103 aa)
	SCAMP1	Secretory carrier-associated membrane protein. (348 aa)
	scamp1	Secretory carrier-associated membrane protein. (337 aa)
	LOC102221735	Uncharacterized protein. (431 aa)
	ENSXMAP00000034956	annotation not available (141 aa)
	LOC102238379	Solute carrier family 17 member 9. (455 aa)
	LOC102216514	Uncharacterized protein. (229 aa)
	ENSXMAP00000030471	Jacalin-type lectin domain-containing protein. (141 aa)
	stbd1	CBM20 domain-containing protein. (884 aa)
	LOC102227322	Coiled-coil domain containing 136b. (468 aa)
	pla1a	Phospholipase A1 member A. (480 aa)
	LOC102227425	Synaptotagmin IIa. (430 aa)
	LOC102236740	Hyaluronidase. (445 aa)
	cav1	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (180 aa)
	bsg	Basigin. (388 aa)
	LOC102233168	Uncharacterized protein. (252 aa)
	pam	Peptidylglycine alpha-amidating monooxygenase. (899 aa)
	syt1	Synaptotagmin Ia. (483 aa)
	LOC102221347	Cytochrome b561. (252 aa)
	LOC102218467	Uncharacterized protein. (250 aa)

Your Current Organism:

Xiphophorus maculatus

NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSXMAP00000039056	LOC102221735	ENSXMAP00000039056	ENSXMAP00000035476	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.493
ENSXMAP00000039056	LOC102222360	ENSXMAP00000039056	ENSXMAP00000003838	V-SNARE coiled-coil homology domain-containing protein.	Synaptotagmin Ib.	0.455
ENSXMAP00000039056	LOC102223935	ENSXMAP00000039056	ENSXMAP00000013746	V-SNARE coiled-coil homology domain-containing protein.	Synaptotagmin Vb.	0.493
ENSXMAP00000039056	LOC102227425	ENSXMAP00000039056	ENSXMAP00000028250	V-SNARE coiled-coil homology domain-containing protein.	Synaptotagmin IIa.	0.493
ENSXMAP00000039056	LOC102229676	ENSXMAP00000039056	ENSXMAP00000038479	V-SNARE coiled-coil homology domain-containing protein.	Vesicle-associated membrane protein 8 (endobrevin).	0.902
ENSXMAP00000039056	LOC102236452	ENSXMAP00000039056	ENSXMAP00000007043	V-SNARE coiled-coil homology domain-containing protein.	Synaptotagmin IXa.	0.458
ENSXMAP00000039056	M4ALT9_XIPMA	ENSXMAP00000039056	ENSXMAP00000015433	V-SNARE coiled-coil homology domain-containing protein.	Synaptotagmin IXb.	0.458
ENSXMAP00000039056	syt1	ENSXMAP00000039056	ENSXMAP00000017516	V-SNARE coiled-coil homology domain-containing protein.	Synaptotagmin Ia.	0.493
LOC102217419	itpr1	ENSXMAP00000002284	ENSXMAP00000008148	Inositol 1,4,5-trisphosphate receptor, type 1a.	Inositol 1,4,5-trisphosphate receptor, type 1b.	0.900
LOC102217419	itpr2	ENSXMAP00000002284	ENSXMAP00000001323	Inositol 1,4,5-trisphosphate receptor, type 1a.	Inositol 1,4,5-trisphosphate receptor, type 2.	0.905
LOC102221347	pam	ENSXMAP00000017440	ENSXMAP00000020865	Cytochrome b561.	Peptidylglycine alpha-amidating monooxygenase.	0.561
LOC102221735	ENSXMAP00000039056	ENSXMAP00000035476	ENSXMAP00000039056	Uncharacterized protein.	V-SNARE coiled-coil homology domain-containing protein.	0.493
LOC102221735	LOC102229676	ENSXMAP00000035476	ENSXMAP00000038479	Uncharacterized protein.	Vesicle-associated membrane protein 8 (endobrevin).	0.493
LOC102221735	LOC102236452	ENSXMAP00000035476	ENSXMAP00000007043	Uncharacterized protein.	Synaptotagmin IXa.	0.476
LOC102221735	M4ALT9_XIPMA	ENSXMAP00000035476	ENSXMAP00000015433	Uncharacterized protein.	Synaptotagmin IXb.	0.473
LOC102222360	ENSXMAP00000039056	ENSXMAP00000003838	ENSXMAP00000039056	Synaptotagmin Ib.	V-SNARE coiled-coil homology domain-containing protein.	0.455
LOC102222360	LOC102229676	ENSXMAP00000003838	ENSXMAP00000038479	Synaptotagmin Ib.	Vesicle-associated membrane protein 8 (endobrevin).	0.455
LOC102222360	LOC102236452	ENSXMAP00000003838	ENSXMAP00000007043	Synaptotagmin Ib.	Synaptotagmin IXa.	0.449
LOC102222360	M4ALT9_XIPMA	ENSXMAP00000003838	ENSXMAP00000015433	Synaptotagmin Ib.	Synaptotagmin IXb.	0.461
LOC102223935	ENSXMAP00000039056	ENSXMAP00000013746	ENSXMAP00000039056	Synaptotagmin Vb.	V-SNARE coiled-coil homology domain-containing protein.	0.493