STRINGSTRING
errfi1 errfi1 LOC102235349 LOC102235349 rad50 rad50 pdgfa pdgfa gpnmb gpnmb vegfa vegfa chp1 chp1 rap2c rap2c RAP2A RAP2A cav1 cav1 ENSXMAP00000023172 ENSXMAP00000023172 LOC102233791 LOC102233791 RAP2B RAP2B GREM1 GREM1 eef2k eef2k vegfc vegfc impact impact LOC102220180 LOC102220180 LOC102226271 LOC102226271 PTPRC PTPRC pdgfc pdgfc LOC102225266 LOC102225266 LOC102232368 LOC102232368
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
errfi1ERBB receptor feedback inhibitor 1a. (423 aa)
LOC102235349PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (570 aa)
rad50RAD50 homolog, double strand break repair protein. (1312 aa)
pdgfaPlatelet-derived growth factor alpha polypeptide b; Belongs to the PDGF/VEGF growth factor family. (228 aa)
gpnmbGlycoprotein (transmembrane) nmb. (622 aa)
vegfaVascular endothelial growth factor Ab; Belongs to the PDGF/VEGF growth factor family. (214 aa)
chp1Calcineurin-like EF-hand protein 1. (195 aa)
rap2cRAP2C, member of RAS oncogene family. (183 aa)
RAP2ARAP2A, member of RAS oncogene family. (183 aa)
cav1Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (180 aa)
ENSXMAP00000023172Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. (288 aa)
LOC102233791Platelet-derived growth factor alpha polypeptide a; Belongs to the PDGF/VEGF growth factor family. (199 aa)
RAP2BRAP2B, member of RAS oncogene family. (187 aa)
GREM1Gremlin. (182 aa)
eef2kEukaryotic elongation factor 2 kinase. (767 aa)
vegfcVascular endothelial growth factor c; Belongs to the PDGF/VEGF growth factor family. (420 aa)
impactImpact RWD domain protein. (319 aa)
LOC102220180MOB kinase activator 1Bb. (217 aa)
LOC102226271JunE proto-oncogene, AP-1 transcription factor subunit. (324 aa)
PTPRCProtein tyrosine phosphatase receptor type C. (1325 aa)
pdgfcPlatelet derived growth factor c; Belongs to the PDGF/VEGF growth factor family. (361 aa)
LOC102225266Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (159 aa)
LOC102232368Platelet-derived growth factor beta polypeptide b; Belongs to the PDGF/VEGF growth factor family. (522 aa)
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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