STRINGSTRING
LOC102229921 LOC102229921 tada2a tada2a auts2 auts2 SMAD4 SMAD4 brd7 brd7 tada2b tada2b LOC102216881 LOC102216881 LOC102219653 LOC102219653 LOC102228719 LOC102228719 LOC102217254 LOC102217254 brca1 brca1 glyr1 glyr1 LOC102225323 LOC102225323
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC102229921Ribosomal protein S6 kinase. (775 aa)
tada2aTranscriptional adapter. (445 aa)
auts2Activator of transcription and developmental regulator AUTS2 a. (1283 aa)
SMAD4Mothers against decapentaplegic homolog. (512 aa)
brd7Bromodomain containing 7. (618 aa)
tada2bTranscriptional adapter. (423 aa)
LOC102216881Transforming growth factor beta; Belongs to the TGF-beta family. (394 aa)
LOC102219653AT rich interactive domain 5A (MRF1-like). (589 aa)
LOC102228719Mothers against decapentaplegic homolog. (503 aa)
LOC102217254Ribosomal protein S6 kinase. (783 aa)
brca1Uncharacterized protein. (1370 aa)
glyr1Glyoxylate reductase 1 homolog (Arabidopsis). (507 aa)
LOC102225323Mothers against decapentaplegic homolog. (563 aa)
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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