(13 nodes) Nuclear inclusion body network (Xiphophorus maculatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	tpr	Translocated promoter region b, nuclear basket protein. (2281 aa)
	nup153	Nucleoporin 153. (1493 aa)
	atxn1	Ataxin 1a. (800 aa)
	M3ZX48_XIPMA	Uncharacterized protein. (352 aa)
	M4AWA9_XIPMA	Translocated promoter region a, nuclear basket protein. (1776 aa)
	M4AYA4_XIPMA	ANK_REP_REGION domain-containing protein. (378 aa)
	rad18	RAD18 E3 ubiquitin protein ligase. (497 aa)
	ENSXMAP00000023550	Peptidase S59 domain-containing protein. (211 aa)
	ENSXMAP00000025712	BRCT domain-containing protein. (149 aa)
	LOC111608380	AXH domain-containing protein. (675 aa)
	Nup98	Nup96 domain-containing protein. (374 aa)
	LOC102218559	RAN binding protein 2. (2916 aa)
	LOC102217612	Ataxin 1b. (825 aa)

Your Current Organism:

Xiphophorus maculatus

NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSXMAP00000023550	LOC102218559	ENSXMAP00000023550	ENSXMAP00000034618	Peptidase S59 domain-containing protein.	RAN binding protein 2.	0.996
ENSXMAP00000023550	M3ZX48_XIPMA	ENSXMAP00000023550	ENSXMAP00000006792	Peptidase S59 domain-containing protein.	Uncharacterized protein.	0.921
ENSXMAP00000023550	M4AWA9_XIPMA	ENSXMAP00000023550	ENSXMAP00000018754	Peptidase S59 domain-containing protein.	Translocated promoter region a, nuclear basket protein.	0.802
ENSXMAP00000023550	Nup98	ENSXMAP00000023550	ENSXMAP00000032029	Peptidase S59 domain-containing protein.	Nup96 domain-containing protein.	0.933
ENSXMAP00000023550	nup153	ENSXMAP00000023550	ENSXMAP00000003443	Peptidase S59 domain-containing protein.	Nucleoporin 153.	0.898
ENSXMAP00000023550	tpr	ENSXMAP00000023550	ENSXMAP00000002499	Peptidase S59 domain-containing protein.	Translocated promoter region b, nuclear basket protein.	0.802
ENSXMAP00000025712	LOC102218559	ENSXMAP00000025712	ENSXMAP00000034618	BRCT domain-containing protein.	RAN binding protein 2.	0.522
ENSXMAP00000025712	M4AYA4_XIPMA	ENSXMAP00000025712	ENSXMAP00000019449	BRCT domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.918
ENSXMAP00000025712	rad18	ENSXMAP00000025712	ENSXMAP00000023351	BRCT domain-containing protein.	RAD18 E3 ubiquitin protein ligase.	0.718
LOC102218559	ENSXMAP00000023550	ENSXMAP00000034618	ENSXMAP00000023550	RAN binding protein 2.	Peptidase S59 domain-containing protein.	0.996
LOC102218559	ENSXMAP00000025712	ENSXMAP00000034618	ENSXMAP00000025712	RAN binding protein 2.	BRCT domain-containing protein.	0.522
LOC102218559	M3ZX48_XIPMA	ENSXMAP00000034618	ENSXMAP00000006792	RAN binding protein 2.	Uncharacterized protein.	0.996
LOC102218559	M4AWA9_XIPMA	ENSXMAP00000034618	ENSXMAP00000018754	RAN binding protein 2.	Translocated promoter region a, nuclear basket protein.	0.981
LOC102218559	M4AYA4_XIPMA	ENSXMAP00000034618	ENSXMAP00000019449	RAN binding protein 2.	ANK_REP_REGION domain-containing protein.	0.522
LOC102218559	Nup98	ENSXMAP00000034618	ENSXMAP00000032029	RAN binding protein 2.	Nup96 domain-containing protein.	0.996
LOC102218559	nup153	ENSXMAP00000034618	ENSXMAP00000003443	RAN binding protein 2.	Nucleoporin 153.	0.994
LOC102218559	tpr	ENSXMAP00000034618	ENSXMAP00000002499	RAN binding protein 2.	Translocated promoter region b, nuclear basket protein.	0.981
M3ZX48_XIPMA	ENSXMAP00000023550	ENSXMAP00000006792	ENSXMAP00000023550	Uncharacterized protein.	Peptidase S59 domain-containing protein.	0.921
M3ZX48_XIPMA	LOC102218559	ENSXMAP00000006792	ENSXMAP00000034618	Uncharacterized protein.	RAN binding protein 2.	0.996
M3ZX48_XIPMA	M4AWA9_XIPMA	ENSXMAP00000006792	ENSXMAP00000018754	Uncharacterized protein.	Translocated promoter region a, nuclear basket protein.	0.802