STRINGSTRING
LOC102232368 LOC102232368 pik3r4 pik3r4 LOC102235349 LOC102235349 epha8 epha8 ENSXMAP00000030540 ENSXMAP00000030540 atg14 atg14 LOC102228065 LOC102228065 ambra1 ambra1 tnfaip8l3 tnfaip8l3 LOC102216881 LOC102216881
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC102232368Platelet-derived growth factor beta polypeptide b; Belongs to the PDGF/VEGF growth factor family. (522 aa)
pik3r4Phosphoinositide-3-kinase, regulatory subunit 4. (1325 aa)
LOC102235349PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (570 aa)
epha8Uncharacterized protein. (1021 aa)
ENSXMAP00000030540SCY domain-containing protein. (95 aa)
atg14Autophagy related 14. (506 aa)
LOC102228065SCY domain-containing protein. (110 aa)
ambra1Autophagy/beclin-1 regulator 1b. (1369 aa)
tnfaip8l3Tumor necrosis factor, alpha-induced protein 8-like 3. (202 aa)
LOC102216881Transforming growth factor beta; Belongs to the TGF-beta family. (394 aa)
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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