(21 nodes) Peroxisomal transport network (Xiphophorus maculatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	pex26	Uncharacterized protein. (309 aa)
	LOC102234479	ATP-binding cassette, sub-family D (ALD), member 2. (737 aa)
	pex19	Peroxisomal biogenesis factor 19. (292 aa)
	lonp2	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import; Belongs to the peptidase S16 family. ECO:0000256\|PROSITE-. (841 aa)
	pex13	Peroxisomal biogenesis factor 13. (426 aa)
	fam185a	Family with sequence similarity 185 member A. (389 aa)
	pex12	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. (347 aa)
	hacl1	2-hydroxyacyl-CoA lyase 1; Belongs to the TPP enzyme family. (572 aa)
	pex5l	Peroxisomal biogenesis factor 5-like a. (621 aa)
	abcd4	ATP-binding cassette, sub-family D (ALD), member 4. (617 aa)
	pex6	Uncharacterized protein. (1102 aa)
	pex2	Peroxisomal biogenesis factor 2. (332 aa)
	pex14	Peroxisomal biogenesis factor 14. (374 aa)
	pex5	Peroxisomal biogenesis factor 5. (677 aa)
	pex3	Peroxisomal biogenesis factor 3. (420 aa)
	abcd3	ATP-binding cassette, sub-family D (ALD), member 3a. (659 aa)
	pex1	Peroxisomal biogenesis factor 1. (1239 aa)
	abcd1	ATP-binding cassette, sub-family D (ALD), member 1. (754 aa)
	LOC102223508	Peroxisomal biogenesis factor 5-like b. (498 aa)
	pex7	Peroxisomal biogenesis factor 7. (349 aa)
	pex10	Peroxisomal biogenesis factor 10. (323 aa)

Your Current Organism:

Xiphophorus maculatus

NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102223508	abcd3	ENSXMAP00000004281	ENSXMAP00000036234	Peroxisomal biogenesis factor 5-like b.	ATP-binding cassette, sub-family D (ALD), member 3a.	0.446
LOC102223508	fam185a	ENSXMAP00000004281	ENSXMAP00000009135	Peroxisomal biogenesis factor 5-like b.	Family with sequence similarity 185 member A.	0.866
LOC102223508	hacl1	ENSXMAP00000004281	ENSXMAP00000013896	Peroxisomal biogenesis factor 5-like b.	2-hydroxyacyl-CoA lyase 1; Belongs to the TPP enzyme family.	0.729
LOC102223508	lonp2	ENSXMAP00000004281	ENSXMAP00000006426	Peroxisomal biogenesis factor 5-like b.	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import; Belongs to the peptidase S16 family. ECO:0000256\|PROSITE-.	0.661
LOC102223508	pex1	ENSXMAP00000004281	ENSXMAP00000002872	Peroxisomal biogenesis factor 5-like b.	Peroxisomal biogenesis factor 1.	0.844
LOC102223508	pex10	ENSXMAP00000004281	ENSXMAP00000004882	Peroxisomal biogenesis factor 5-like b.	Peroxisomal biogenesis factor 10.	0.868
LOC102223508	pex12	ENSXMAP00000004281	ENSXMAP00000010875	Peroxisomal biogenesis factor 5-like b.	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	0.931
LOC102223508	pex13	ENSXMAP00000004281	ENSXMAP00000007397	Peroxisomal biogenesis factor 5-like b.	Peroxisomal biogenesis factor 13.	0.928
LOC102223508	pex14	ENSXMAP00000004281	ENSXMAP00000027838	Peroxisomal biogenesis factor 5-like b.	Peroxisomal biogenesis factor 14.	0.994
LOC102223508	pex19	ENSXMAP00000004281	ENSXMAP00000005457	Peroxisomal biogenesis factor 5-like b.	Peroxisomal biogenesis factor 19.	0.461
LOC102223508	pex2	ENSXMAP00000004281	ENSXMAP00000027172	Peroxisomal biogenesis factor 5-like b.	Peroxisomal biogenesis factor 2.	0.754
LOC102223508	pex3	ENSXMAP00000004281	ENSXMAP00000033531	Peroxisomal biogenesis factor 5-like b.	Peroxisomal biogenesis factor 3.	0.531
LOC102223508	pex5l	ENSXMAP00000004281	ENSXMAP00000018367	Peroxisomal biogenesis factor 5-like b.	Peroxisomal biogenesis factor 5-like a.	0.902
LOC102223508	pex6	ENSXMAP00000004281	ENSXMAP00000026463	Peroxisomal biogenesis factor 5-like b.	Uncharacterized protein.	0.851
LOC102223508	pex7	ENSXMAP00000004281	ENSXMAP00000004526	Peroxisomal biogenesis factor 5-like b.	Peroxisomal biogenesis factor 7.	0.993
LOC102234479	abcd3	ENSXMAP00000005026	ENSXMAP00000036234	ATP-binding cassette, sub-family D (ALD), member 2.	ATP-binding cassette, sub-family D (ALD), member 3a.	0.777
LOC102234479	abcd4	ENSXMAP00000005026	ENSXMAP00000022026	ATP-binding cassette, sub-family D (ALD), member 2.	ATP-binding cassette, sub-family D (ALD), member 4.	0.704
LOC102234479	fam185a	ENSXMAP00000005026	ENSXMAP00000009135	ATP-binding cassette, sub-family D (ALD), member 2.	Family with sequence similarity 185 member A.	0.685
LOC102234479	pex12	ENSXMAP00000005026	ENSXMAP00000010875	ATP-binding cassette, sub-family D (ALD), member 2.	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	0.725
LOC102234479	pex13	ENSXMAP00000005026	ENSXMAP00000007397	ATP-binding cassette, sub-family D (ALD), member 2.	Peroxisomal biogenesis factor 13.	0.781