STRINGSTRING
LOC102225993 LOC102225993 nup133 nup133 polr2d polr2d pom121 pom121 pkd1 pkd1 LOC102217946 LOC102217946 thoc2 thoc2 cchcr1 cchcr1 nup214 nup214 LOC102236588 LOC102236588 ncbp2 ncbp2 LOC102222720 LOC102222720 sarnp sarnp NEMF NEMF STRADB STRADB eny2 eny2 ddx39a ddx39a pcid2 pcid2 poldip3 poldip3 LOC102233053 LOC102233053 nutf2 nutf2 nup188 nup188 lsg1 lsg1 ythdc1 ythdc1 NUP62 NUP62 nup155 nup155 ssb ssb fyttd1 fyttd1 eif6 eif6 LOC102220647 LOC102220647 sdad1 sdad1 hspa9 hspa9 atxn1 atxn1 LOC102232994 LOC102232994 nup153 nup153 thoc3 thoc3 nxf1 nxf1 LOC102219298 LOC102219298 xpo5 xpo5 xpot xpot LOC102217597 LOC102217597 tpr tpr thoc1 thoc1 thoc7 thoc7 LOC102229404 LOC102229404 abce1 abce1 nup85 nup85 LOC102216881 LOC102216881 M3ZEV5_XIPMA M3ZEV5_XIPMA LOC102219029 LOC102219029 xpo7 xpo7 LOC102216586 LOC102216586 nup160 nup160 LOC102217612 LOC102217612 LOC102232974 LOC102232974 strada strada ENSXMAP00000039466 ENSXMAP00000039466 lzts3 lzts3 nop9 nop9 xpo6 xpo6 chtop chtop LOC102221535 LOC102221535 ENSXMAP00000036629 ENSXMAP00000036629 LOC102216981 LOC102216981 thoc6 thoc6 chp1 chp1 gle1 gle1 DDX39A DDX39A LOC111612017 LOC111612017 LOC102219047 LOC102219047 ankle1 ankle1 LOC111608380 LOC111608380 ltv1 ltv1 LOC102237756 LOC102237756 thoc5 thoc5 styx styx SRSF3 SRSF3 rae1 rae1 LOC102225349 LOC102225349 lzts2 lzts2 nup93 nup93 ctdspl2 ctdspl2 ENSXMAP00000021805 ENSXMAP00000021805 nup88 nup88 phax phax nol6 nol6 LOC102229321 LOC102229321 M4AWA9_XIPMA M4AWA9_XIPMA nmd3 nmd3 NCBP1 NCBP1 LOC102218303 LOC102218303 LOC102218041 LOC102218041 LOC102220164 LOC102220164 EIF4ENIF1 EIF4ENIF1 alkbh5 alkbh5 LOC102229957 LOC102229957 mcm3ap mcm3ap xpo4 xpo4 IWS1 IWS1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC102225993Desumoylating isopeptidase 1a. (168 aa)
nup133Nucleoporin 133. (1138 aa)
polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (104 aa)
pom121POM121 transmembrane nucleoporin. (1160 aa)
pkd1Polycystic kidney disease 1a. (4563 aa)
LOC102217946Aly/REF export factor. (272 aa)
thoc2THO complex 2. (1490 aa)
cchcr1Uncharacterized protein. (856 aa)
nup214Nup214_FG domain-containing protein. (1990 aa)
LOC102236588Nucleoporin 42. (425 aa)
ncbp2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (164 aa)
LOC102222720Desumoylating isopeptidase 1b. (164 aa)
sarnpSAP domain containing ribonucleoprotein. (211 aa)
NEMFNuclear export mediator factor. (1045 aa)
STRADBSTE20 related adaptor beta. (408 aa)
eny2Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (122 aa)
ddx39aUncharacterized protein. (427 aa)
pcid2PCI domain containing 2. (395 aa)
poldip3Polymerase (DNA-directed), delta interacting protein 3. (495 aa)
LOC102233053Exportin 1 (CRM1 homolog, yeast) a. (1066 aa)
nutf2Nuclear transport factor 2. (103 aa)
nup188Nucleoporin 188. (1628 aa)
lsg1Large 60S subunit nuclear export GTPase 1. (651 aa)
ythdc1YTH domain containing 1. (662 aa)
NUP62Nucleoporin 62. (549 aa)
nup155Nucleoporin 155. (1346 aa)
ssbSmall RNA binding exonuclease protection factor La. (403 aa)
fyttd1Uncharacterized protein. (323 aa)
eif6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (246 aa)
LOC102220647Zinc finger CCCH-type containing 11A. (832 aa)
sdad1Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (684 aa)
hspa9Heat shock protein 9; Belongs to the heat shock protein 70 family. (680 aa)
atxn1Ataxin 1a. (800 aa)
LOC102232994MALT paracaspase 2. (819 aa)
nup153Nucleoporin 153. (1493 aa)
thoc3THO complex 3. (330 aa)
nxf1Zgc:153681. (631 aa)
LOC102219298MALT paracaspase 3. (565 aa)
xpo5Exportin 5. (1111 aa)
xpotExportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. (971 aa)
LOC102217597CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 3. (403 aa)
tprTranslocated promoter region b, nuclear basket protein. (2281 aa)
thoc1THO complex 1. (654 aa)
thoc7THO complex 7. (203 aa)
LOC102229404Nucleophosmin 1b. (320 aa)
abce1ATP-binding cassette, sub-family E (OABP), member 1. (599 aa)
nup85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (654 aa)
LOC102216881Transforming growth factor beta; Belongs to the TGF-beta family. (394 aa)
M3ZEV5_XIPMASEM1 26S proteasome complex subunit. (70 aa)
LOC102219029TSC complex subunit 1. (977 aa)
xpo7Exportin 7. (1091 aa)
LOC102216586Nucleophosmin 1a. (303 aa)
nup160Nucleoporin 160. (1416 aa)
LOC102217612Ataxin 1b. (825 aa)
LOC102232974Leucine zipper putative tumor suppressor 2 homolog; Negative regulator of katanin-mediated microtubule severing and release from the centrosome. Required for central spindle formation and the completion of cytokinesis. Negative regulator of the Wnt signaling pathway. Represses beta-catenin-mediated transcriptional activation by promoting the nuclear exclusion of beta-catenin. Belongs to the LZTS2 family. (778 aa)
stradaSTE20 related adaptor alpha. (428 aa)
ENSXMAP00000039466Uncharacterized protein. (100 aa)
lzts3Leucine zipper, putative tumor suppressor family member 3b. (1097 aa)
nop9Uncharacterized protein. (617 aa)
xpo6Exportin 6. (1160 aa)
chtopChromatin target of PRMT1a. (196 aa)
LOC102221535FCP1 homology domain-containing protein. (473 aa)
ENSXMAP00000036629Uncharacterized protein. (75 aa)
LOC102216981Exportin 1 (CRM1 homolog, yeast) b. (1071 aa)
thoc6THO complex 6. (354 aa)
chp1Calcineurin-like EF-hand protein 1. (195 aa)
gle1GLE1 RNA export mediator. (740 aa)
DDX39ADExD-box helicase 39A. (427 aa)
LOC111612017Uncharacterized protein. (229 aa)
LOC102219047MALT paracaspase 1. (828 aa)
ankle1Zgc:85936. (1142 aa)
LOC111608380AXH domain-containing protein. (675 aa)
ltv1LTV1 ribosome biogenesis factor. (469 aa)
LOC102237756TSC complex subunit 1b. (1243 aa)
thoc5THO complex 5. (683 aa)
styxSerine/threonine/tyrosine interacting protein. (202 aa)
SRSF3Serine and arginine rich splicing factor 3b. (165 aa)
rae1Ribonucleic acid export 1. (369 aa)
LOC102225349Zgc:193690. (487 aa)
lzts2Leucine zipper putative tumor suppressor 2 homolog; Negative regulator of katanin-mediated microtubule severing and release from the centrosome. Required for central spindle formation and the completion of cytokinesis. Negative regulator of the Wnt signaling pathway. Represses beta-catenin-mediated transcriptional activation by promoting the nuclear exclusion of beta-catenin. Belongs to the LZTS2 family. (696 aa)
nup93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (820 aa)
ctdspl2CTD small phosphatase like 2. (476 aa)
ENSXMAP00000021805Uncharacterized protein. (210 aa)
nup88Nucleoporin 88. (721 aa)
phaxPhosphorylated adaptor for RNA export. (410 aa)
nol6Nucleolar protein 6. (1145 aa)
LOC102229321DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast). (488 aa)
M4AWA9_XIPMATranslocated promoter region a, nuclear basket protein. (1776 aa)
nmd360S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (504 aa)
NCBP1Nuclear cap binding protein subunit 1. (796 aa)
LOC102218303Si:dkeyp-97b10.3. (550 aa)
LOC102218041Uncharacterized protein; Belongs to the peptidase C14A family. (729 aa)
LOC102220164RRM domain-containing protein. (242 aa)
EIF4ENIF1Eukaryotic translation initiation factor 4E nuclear import factor 1. (948 aa)
alkbh5AlkB homolog 5, RNA demethylase. (375 aa)
LOC102229957RRM domain-containing protein. (160 aa)
mcm3apMinichromosome maintenance complex component 3 associated protein. (2251 aa)
xpo4Exportin 4. (1173 aa)
IWS1Interacts with SUPT6H, CTD assembly factor 1. (723 aa)
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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