STRINGSTRING
pmvk pmvk LOC102231514 LOC102231514 gramd1a gramd1a TGFBR2 TGFBR2 smo smo gramd1c gramd1c LOC102216881 LOC102216881 gramd1b gramd1b podn podn mlc1 mlc1 rusc1 rusc1 LOC102218864 LOC102218864
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pmvkPhosphomevalonate kinase. (202 aa)
LOC102231514Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (598 aa)
gramd1aGRAM domain containing 1A. (905 aa)
TGFBR2Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (539 aa)
smoSmoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. (811 aa)
gramd1cGRAM domain containing 1c. (657 aa)
LOC102216881Transforming growth factor beta; Belongs to the TGF-beta family. (394 aa)
gramd1bGRAM domain containing 1Bb. (918 aa)
podnPodocan. (587 aa)
mlc1Modulator of VRAC current 1. (402 aa)
rusc1Uncharacterized protein. (1574 aa)
LOC102218864SCY domain-containing protein. (141 aa)
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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