STRINGSTRING
ascc3 ascc3 mcm2 mcm2 rad51 rad51 M3ZFE3_XIPMA M3ZFE3_XIPMA LOC102227958 LOC102227958 dhx36 dhx36 MCMDC2 MCMDC2 gtf2f2 gtf2f2 ruvbl1 ruvbl1 rfc5 rfc5 chd2 chd2 gins2 gins2 LOC102218810 LOC102218810 ercc3 ercc3 top3a top3a ighmbp2 ighmbp2 LOC102237263 LOC102237263 ddx11 ddx11 M3ZPQ6_XIPMA M3ZPQ6_XIPMA top3b top3b mcm5 mcm5 ddx1 ddx1 rtel1 rtel1 LOC102223095 LOC102223095 brip1 brip1 ruvbl2 ruvbl2 chtf8 chtf8 nbn nbn chtf18 chtf18 fancm fancm zranb3 zranb3 Atrx Atrx M4A5A7_XIPMA M4A5A7_XIPMA RPA1 RPA1 dhx9 dhx9 LOC102236567 LOC102236567 top2a top2a LOC102233674 LOC102233674 recql5 recql5 helq helq LOC102228555 LOC102228555 supv3l1 supv3l1 cdc45 cdc45 recql4 recql4 LOC102230723 LOC102230723 smarcad1 smarcad1 xrcc5 xrcc5 gins3 gins3 aire aire chd3 chd3 chd9 chd9 mcm7 mcm7 wrnip1 wrnip1 LOC102229556 LOC102229556 top2b top2b twnk twnk mcm6 mcm6 chd7 chd7 fbh1 fbh1 LOC111609624 LOC111609624 gins4 gins4 ENSXMAP00000024871 ENSXMAP00000024871 chd1 chd1 ENSXMAP00000025202 ENSXMAP00000025202 ENSXMAP00000025754 ENSXMAP00000025754 ENSXMAP00000026410 ENSXMAP00000026410 blm blm rfc2 rfc2 rfc4 rfc4 recql recql ENSXMAP00000032345 ENSXMAP00000032345 ENSXMAP00000032469 ENSXMAP00000032469 xrcc6 xrcc6 ENSXMAP00000033369 ENSXMAP00000033369 ercc2 ercc2 mcm8 mcm8 dna2 dna2 Mcm9 Mcm9 chd5 chd5 ENSXMAP00000035797 ENSXMAP00000035797 rpa1 rpa1 dqx1 dqx1 mcm3 mcm3 pot1 pot1 rad50 rad50 mcm4 mcm4 rfc3 rfc3 chd1l chd1l
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ascc3Activating signal cointegrator 1 complex subunit 3. (2200 aa)
mcm2DNA helicase; Belongs to the MCM family. (886 aa)
rad51DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (338 aa)
M3ZFE3_XIPMAExcision repair cross-complementation group 6-like. (1042 aa)
LOC102227958Chromodomain helicase DNA binding protein 4a. (1585 aa)
dhx36DEAH (Asp-Glu-Ala-His) box polypeptide 36. (1065 aa)
MCMDC2Minichromosome maintenance domain containing 2. (649 aa)
gtf2f2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (252 aa)
ruvbl1RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (456 aa)
rfc5Replication factor C (activator 1) 5. (335 aa)
chd2Chromodomain helicase DNA binding protein 2. (1812 aa)
gins2DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family. (186 aa)
LOC102218810General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (260 aa)
ercc3Excision repair cross-complementation group 3. (783 aa)
top3aDNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (1023 aa)
ighmbp2Immunoglobulin mu DNA binding protein 2. (980 aa)
LOC102237263ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. (629 aa)
ddx11DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11. (897 aa)
M3ZPQ6_XIPMAHelicase for meiosis 1. (869 aa)
top3bDNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (858 aa)
mcm5DNA helicase; Belongs to the MCM family. (695 aa)
ddx1DEAD (Asp-Glu-Ala-Asp) box helicase 1. (740 aa)
rtel1Regulator of telomere elongation helicase 1; ATP-dependent DNA helicase implicated in telomere-length regulation, DNA repair and the maintenance of genomic stability. Acts as an anti-recombinase to counteract toxic recombination and limit crossover during meiosis. Regulates meiotic recombination and crossover homeostasis by physically dissociating strand invasion events and thereby promotes noncrossover repair by meiotic synthesis dependent strand annealing (SDSA) as well as disassembly of D loop recombination intermediates. Also disassembles T loops and prevents telomere fragility by [...] (1165 aa)
LOC102223095DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (503 aa)
brip1BRCA1 interacting protein C-terminal helicase 1. (1188 aa)
ruvbl2RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (459 aa)
chtf8CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae). (133 aa)
nbnNibrin. (831 aa)
chtf18AAA domain-containing protein. (922 aa)
fancmUncharacterized protein. (1911 aa)
zranb3Zinc finger, RAN-binding domain containing 3. (1095 aa)
AtrxATRX chromatin remodeler. (1195 aa)
M4A5A7_XIPMADNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (586 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (700 aa)
dhx9DEAH (Asp-Glu-Ala-His) box helicase 9. (1246 aa)
LOC102236567Uncharacterized protein. (1780 aa)
top2aDNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1536 aa)
LOC102233674Uncharacterized protein. (1901 aa)
recql5ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (992 aa)
helqHelicase, POLQ like. (992 aa)
LOC102228555DEAH (Asp-Glu-Ala-His) box polypeptide 32b. (682 aa)
supv3l1SUV3-like helicase. (773 aa)
cdc45CDC45 cell division cycle 45 homolog (S. cerevisiae). (570 aa)
recql4RecQ helicase-like 4. (1385 aa)
LOC102230723DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (687 aa)
smarcad1Uncharacterized protein. (1090 aa)
xrcc5X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (722 aa)
gins3GINS complex subunit 3. (211 aa)
airePHD-type domain-containing protein. (353 aa)
chd3Chromodomain helicase DNA binding protein 3. (1540 aa)
chd9Chromodomain helicase DNA binding protein 9. (3004 aa)
mcm7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (724 aa)
wrnip1WRN helicase interacting protein 1. (595 aa)
LOC102229556DEAH (Asp-Glu-Ala-His) box polypeptide 32a. (733 aa)
top2bDNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1589 aa)
twnkTwinkle mtDNA helicase. (721 aa)
mcm6DNA helicase; Belongs to the MCM family. (816 aa)
chd7Chromodomain helicase DNA binding protein 7. (3279 aa)
fbh1F-box DNA helicase 1. (1056 aa)
LOC111609624ATP-dependent DNA helicase; Belongs to the helicase family. (2786 aa)
gins4DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. (224 aa)
ENSXMAP00000024871MCM domain-containing protein; Belongs to the MCM family. (351 aa)
chd1Chromodomain helicase DNA binding protein 1. (1672 aa)
ENSXMAP00000025202Uncharacterized protein. (105 aa)
ENSXMAP00000025754ATP-dependent DNA helicase; Belongs to the helicase family. (2816 aa)
ENSXMAP00000026410ATP-dependent DNA helicase; Belongs to the helicase family. (2248 aa)
blmBLM RecQ like helicase. (1398 aa)
rfc2Replication factor C (activator 1) 2. (357 aa)
rfc4Replication factor C (activator 1) 4. (357 aa)
recqlATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (642 aa)
ENSXMAP00000032345ATP-dependent DNA helicase; Belongs to the helicase family. (2302 aa)
ENSXMAP00000032469Chromo domain-containing protein. (485 aa)
xrcc6X-ray repair complementing defective repair in Chinese hamster cells 6. (610 aa)
ENSXMAP00000033369Uncharacterized protein. (486 aa)
ercc2Excision repair cross-complementation group 2. (760 aa)
mcm8Minichromosome maintenance 8 homologous recombination repair factor; Belongs to the MCM family. (846 aa)
dna2Uncharacterized protein. (1324 aa)
Mcm9Uncharacterized protein. (158 aa)
chd5Uncharacterized protein. (2001 aa)
ENSXMAP00000035797annotation not available (2248 aa)
rpa1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (600 aa)
dqx1DEAQ box RNA-dependent ATPase 1. (850 aa)
mcm3DNA helicase; Belongs to the MCM family. (836 aa)
pot1Telo_bind domain-containing protein. (889 aa)
rad50RAD50 homolog, double strand break repair protein. (1312 aa)
mcm4DNA helicase; Belongs to the MCM family. (868 aa)
rfc3Replication factor C (activator 1) 3. (356 aa)
chd1lChromodomain helicase DNA binding protein 1-like. (1013 aa)
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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