STRINGSTRING
lrrc32 lrrc32 LOC102222578 LOC102222578 LOC102236077 LOC102236077 tyrobp tyrobp LOC102225323 LOC102225323 LOC102218732 LOC102218732 LOC102219317 LOC102219317 LOC102228719 LOC102228719 LOC102223216 LOC102223216 itgb8 itgb8 itgb6 itgb6 LOC102230011 LOC102230011 LAPTM4B LAPTM4B cd34 cd34 LOC102235486 LOC102235486 ENSXMAP00000031631 ENSXMAP00000031631 SMAD4 SMAD4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lrrc32Leucine rich repeat containing 32. (730 aa)
LOC102222578Uncharacterized protein. (652 aa)
LOC102236077SERPIN domain-containing protein; Belongs to the serpin family. (514 aa)
tyrobpUncharacterized protein. (108 aa)
LOC102225323Mothers against decapentaplegic homolog. (563 aa)
LOC102218732Lumican. (342 aa)
LOC102219317Heat shock protein 90, alpha (cytosolic), class B member 1. (723 aa)
LOC102228719Mothers against decapentaplegic homolog. (503 aa)
LOC102223216Transforming growth factor beta; Belongs to the TGF-beta family. (414 aa)
itgb8Integrin beta; Belongs to the integrin beta chain family. (760 aa)
itgb6Integrin beta; Belongs to the integrin beta chain family. (665 aa)
LOC102230011Fibronectin 1a. (2488 aa)
LAPTM4BLysosomal protein transmembrane 4 beta. (236 aa)
cd34Si:ch211-286o17.1. (318 aa)
LOC102235486SERPIN domain-containing protein; Belongs to the serpin family. (487 aa)
ENSXMAP00000031631Integrin_b_cyt domain-containing protein. (97 aa)
SMAD4Mothers against decapentaplegic homolog. (512 aa)
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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