24 items (Xiphophorus maculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	lamb1	Laminin, beta 1a. (1797 aa)
	LOC102218137	Uncharacterized protein. (432 aa)
	LOC102225266	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (159 aa)
	M3ZMY0_XIPMA	Netrin g2a. (504 aa)
	LOC102232124	Uncharacterized protein. (1781 aa)
	ntng1	Netrin g1a. (540 aa)
	hpn	Hepsin; Belongs to the peptidase S1 family. (427 aa)
	LOC102234871	Si:dkey-202e22.2. (655 aa)
	LOC102229544	ZnMc domain-containing protein. (470 aa)
	LOC102235305	Peptidase S72 domain-containing protein. (908 aa)
	LOC102225466	Laminin, beta 2 (laminin S). (1692 aa)
	LOC102225728	Laminin, beta 2-like. (1840 aa)
	LOC102232175	Uncharacterized protein. (638 aa)
	pxdn	Peroxidasin. (1571 aa)
	lamb3	Uncharacterized protein. (1175 aa)
	LOC102216872	Fibronectin leucine rich transmembrane protein 2. (659 aa)
	LOC102227762	Fibronectin leucine rich transmembrane protein 2. (651 aa)
	cav1	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (180 aa)
	ENSXMAP00000025455	Netrin G2. (535 aa)
	LOC102229933	Vav 3 guanine nucleotide exchange factor b. (469 aa)
	ntn4	Netrin 4. (627 aa)
	LOC102221918	Matrix metallopeptidase 11a. (481 aa)
	gas2	Growth arrest-specific 2a. (341 aa)
	dag1	Dystroglycan 1. (893 aa)

Your Current Organism:

Xiphophorus maculatus

NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102216872	LOC102229933	ENSXMAP00000019726	ENSXMAP00000025903	Fibronectin leucine rich transmembrane protein 2.	Vav 3 guanine nucleotide exchange factor b.	0.424
LOC102216872	ntng1	ENSXMAP00000019726	ENSXMAP00000006502	Fibronectin leucine rich transmembrane protein 2.	Netrin g1a.	0.424
LOC102218137	hpn	ENSXMAP00000000844	ENSXMAP00000008905	Uncharacterized protein.	Hepsin; Belongs to the peptidase S1 family.	0.530
LOC102227762	LOC102229933	ENSXMAP00000020392	ENSXMAP00000025903	Fibronectin leucine rich transmembrane protein 2.	Vav 3 guanine nucleotide exchange factor b.	0.424
LOC102227762	ntng1	ENSXMAP00000020392	ENSXMAP00000006502	Fibronectin leucine rich transmembrane protein 2.	Netrin g1a.	0.424
LOC102229933	LOC102216872	ENSXMAP00000025903	ENSXMAP00000019726	Vav 3 guanine nucleotide exchange factor b.	Fibronectin leucine rich transmembrane protein 2.	0.424
LOC102229933	LOC102227762	ENSXMAP00000025903	ENSXMAP00000020392	Vav 3 guanine nucleotide exchange factor b.	Fibronectin leucine rich transmembrane protein 2.	0.424
LOC102232124	LOC102235305	ENSXMAP00000004470	ENSXMAP00000015739	Uncharacterized protein.	Peptidase S72 domain-containing protein.	0.708
LOC102232124	dag1	ENSXMAP00000004470	ENSXMAP00000036547	Uncharacterized protein.	Dystroglycan 1.	0.708
LOC102235305	LOC102232124	ENSXMAP00000015739	ENSXMAP00000004470	Peptidase S72 domain-containing protein.	Uncharacterized protein.	0.708
LOC102235305	dag1	ENSXMAP00000015739	ENSXMAP00000036547	Peptidase S72 domain-containing protein.	Dystroglycan 1.	0.902
LOC102235305	lamb1	ENSXMAP00000015739	ENSXMAP00000016243	Peptidase S72 domain-containing protein.	Laminin, beta 1a.	0.733
LOC102235305	lamb3	ENSXMAP00000015739	ENSXMAP00000018842	Peptidase S72 domain-containing protein.	Uncharacterized protein.	0.711
cav1	pxdn	ENSXMAP00000025385	ENSXMAP00000018741	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Peroxidasin.	0.461
dag1	LOC102232124	ENSXMAP00000036547	ENSXMAP00000004470	Dystroglycan 1.	Uncharacterized protein.	0.708
dag1	LOC102235305	ENSXMAP00000036547	ENSXMAP00000015739	Dystroglycan 1.	Peptidase S72 domain-containing protein.	0.902
dag1	lamb1	ENSXMAP00000036547	ENSXMAP00000016243	Dystroglycan 1.	Laminin, beta 1a.	0.733
dag1	lamb3	ENSXMAP00000036547	ENSXMAP00000018842	Dystroglycan 1.	Uncharacterized protein.	0.711
hpn	LOC102218137	ENSXMAP00000008905	ENSXMAP00000000844	Hepsin; Belongs to the peptidase S1 family.	Uncharacterized protein.	0.530
lamb1	LOC102235305	ENSXMAP00000016243	ENSXMAP00000015739	Laminin, beta 1a.	Peptidase S72 domain-containing protein.	0.733