STRINGSTRING
ACTA1 ACTA1 LOC102228719 LOC102228719 tbx3 tbx3 LOC102233599 LOC102233599 ACTC1 ACTC1 LOC102237610 LOC102237610 acvr1 acvr1 TGFBR2 TGFBR2 acta2 acta2 vsx1 vsx1 taf10 taf10 snai2 snai2 TMEM100 TMEM100 LOC102225323 LOC102225323 exoc4 exoc4 msx1 msx1 LOC102231514 LOC102231514 lef1 lef1 LOC102221328 LOC102221328 SMAD4 SMAD4 LOC102236735 LOC102236735
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACTA1Actin alpha 1, skeletal muscle. (377 aa)
LOC102228719Mothers against decapentaplegic homolog. (503 aa)
tbx3T-box transcription factor 3a. (708 aa)
LOC102233599Uncharacterized protein. (377 aa)
ACTC1Zgc:86709. (377 aa)
LOC102237610Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (517 aa)
acvr1Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (683 aa)
TGFBR2Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (539 aa)
acta2Actin alpha 2, smooth muscle. (377 aa)
vsx1Visual system homeobox 1 homolog, chx10-like. (343 aa)
taf10Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (186 aa)
snai2Snail family zinc finger 2. (260 aa)
TMEM100Transmembrane protein 100. (139 aa)
LOC102225323Mothers against decapentaplegic homolog. (563 aa)
exoc4Exocyst complex component 4. (983 aa)
msx1Muscle segment homeobox 1a. (281 aa)
LOC102231514Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (598 aa)
lef1Lymphoid enhancer-binding factor 1. (379 aa)
LOC102221328T-box transcription factor 3b. (498 aa)
SMAD4Mothers against decapentaplegic homolog. (512 aa)
LOC102236735Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (501 aa)
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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