STRINGSTRING
gtf2h5 gtf2h5 taf5 taf5 taf8 taf8 LOC102235655 LOC102235655 atf6b atf6b LOC102237914 LOC102237914 gtf2f2 gtf2f2 rxra rxra LOC102234111 LOC102234111 e2f4 e2f4 LOC102236235 LOC102236235 LOC102216396 LOC102216396 LOC102223630 LOC102223630 LOC102233551 LOC102233551 LOC102216798 LOC102216798 LOC102225971 LOC102225971 xbp1 xbp1 dr1 dr1 smad6 smad6 LOC102218810 LOC102218810 smad3 smad3 ercc3 ercc3 Trrap Trrap LOC102226271 LOC102226271 gtf2h1 gtf2h1 LOC102224322 LOC102224322 e2f1 e2f1 LOC102228719 LOC102228719 e2f7 e2f7 med8 med8 LOC102225341 LOC102225341 LOC102222784 LOC102222784 Med31 Med31 BACH1 BACH1 NR5A1 NR5A1 bcl9l bcl9l M3ZZL9_XIPMA M3ZZL9_XIPMA med17 med17 taf6l taf6l LOC102232234 LOC102232234 nfe2 nfe2 M4A191_XIPMA M4A191_XIPMA pou2af1 pou2af1 smad9 smad9 med4 med4 ARNTL2 ARNTL2 stat3 stat3 hltf hltf LOC106699913 LOC106699913 LOC102233582 LOC102233582 e2f8 e2f8 nkx2-5 nkx2-5 atf7 atf7 fam76b fam76b drap1 drap1 tfdp1 tfdp1 LOC102224223 LOC102224223 taf6 taf6 gtf2e2 gtf2e2 LOC102218641 LOC102218641 LOC102232468 LOC102232468 LOC102216582 LOC102216582 e2f2 e2f2 MAFG MAFG fosl1 fosl1 atf6 atf6 taf7l taf7l mnat1 mnat1 gtf2h4 gtf2h4 gtf2f1 gtf2f1 RXRB RXRB MAX MAX med18 med18 tbp tbp LOC102218843 LOC102218843 LOC102224043 LOC102224043 taf11 taf11 taf3 taf3 rfx5 rfx5 ddit3 ddit3 med14 med14 ascc2 ascc2 taf10 taf10 cebpd cebpd LOC102237417 LOC102237417 taf13 taf13 ascl1 ascl1 LOC102227508 LOC102227508 Cebpg Cebpg cebpa cebpa M4AZP2_XIPMA M4AZP2_XIPMA JUND JUND smad2 smad2 LOC102231606 LOC102231606 ccnh ccnh LOC102225323 LOC102225323 LOC102222672 LOC102222672 LOC106699687 LOC106699687 atf2 atf2 LOC102227900 LOC102227900 ENSXMAP00000023172 ENSXMAP00000023172 LOC102237941 LOC102237941 gemin5 gemin5 LOC102221737 LOC102221737 LOC102225341-2 LOC102225341-2 med1 med1 LOC102220925 LOC102220925 ENSXMAP00000025895 ENSXMAP00000025895 pygo2 pygo2 nfe2l2 nfe2l2 TAF4 TAF4 LOC102222838 LOC102222838 LOC102237376 LOC102237376 LOC102226161 LOC102226161 LOC102222228 LOC102222228 LOC102229614 LOC102229614 trip4 trip4 LOC102218909 LOC102218909 taf2 taf2 taf5l taf5l gtf2b gtf2b e2f3 e2f3 CLOCK CLOCK ENSXMAP00000029551 ENSXMAP00000029551 lef1 lef1 stat4 stat4 nfyb nfyb LOC102218999 LOC102218999 LOC102219340 LOC102219340 ENSXMAP00000030259 ENSXMAP00000030259 LOC102230421 LOC102230421 rb1 rb1 SMAD4 SMAD4 tcf7l2 tcf7l2 adnp adnp ENSXMAP00000031638 ENSXMAP00000031638 hlf hlf tcf7 tcf7 smad1 smad1 ENSXMAP00000032804 ENSXMAP00000032804 med9 med9 med6 med6 nfatc2 nfatc2 ercc2 ercc2 nr5a2 nr5a2 LOC102216515 LOC102216515 ENSXMAP00000033891 ENSXMAP00000033891 rfxank rfxank LOC102226672 LOC102226672 HAND1 HAND1 ASCL4 ASCL4 ASCL5 ASCL5 max max nfya nfya cbfb cbfb ENSXMAP00000036268 ENSXMAP00000036268 taf12 taf12 ENSXMAP00000036812 ENSXMAP00000036812 ENSXMAP00000036885 ENSXMAP00000036885 rfxap rfxap smad7 smad7 gtf2a1 gtf2a1 gtf2e1 gtf2e1 LOC102216993 LOC102216993 LOC102220945 LOC102220945 LOC102217136 LOC102217136 nfyc nfyc bach2 bach2 creb1 creb1 nr1h3 nr1h3 atf3 atf3 gtf2h3 gtf2h3 supt3h supt3h ENSXMAP00000040652 ENSXMAP00000040652 SMAD3 SMAD3 ENSXMAP00000041178 ENSXMAP00000041178 LOC102223022 LOC102223022 ENSXMAP00000041640 ENSXMAP00000041640 cebpz cebpz
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gtf2h5General transcription factor IIH, polypeptide 5. (71 aa)
taf5TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (746 aa)
taf8TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (306 aa)
LOC102235655Aryl hydrocarbon receptor nuclear translocator-like 2. (636 aa)
atf6bBZIP domain-containing protein. (716 aa)
LOC102237914Signal transducer and activator of transcription. (675 aa)
gtf2f2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (252 aa)
rxraRetinoid X receptor, alpha a. (496 aa)
LOC102234111Transcription factor 7 like 1b. (582 aa)
e2f4E2F transcription factor 4. (389 aa)
LOC102236235Signal transducer and activator of transcription. (797 aa)
LOC102216396Activating transcription factor 1. (310 aa)
LOC102223630Mothers against decapentaplegic homolog. (507 aa)
LOC102233551THAP-type domain-containing protein. (374 aa)
LOC102216798Nuclear receptor subfamily 5, group A, member 5. (531 aa)
LOC102225971TFIIS N-terminal domain-containing protein. (508 aa)
xbp1X-box binding protein 1. (263 aa)
dr1Down-regulator of transcription 1. (176 aa)
smad6Mothers against decapentaplegic homolog. (492 aa)
LOC102218810General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (260 aa)
smad3Mothers against decapentaplegic homolog. (425 aa)
ercc3Excision repair cross-complementation group 3. (783 aa)
TrrapUncharacterized protein. (564 aa)
LOC102226271JunE proto-oncogene, AP-1 transcription factor subunit. (324 aa)
gtf2h1General transcription factor IIH, polypeptide 1. (550 aa)
LOC102224322Mothers against decapentaplegic homolog. (467 aa)
e2f1E2F transcription factor 1. (456 aa)
LOC102228719Mothers against decapentaplegic homolog. (503 aa)
e2f7E2F transcription factor 7. (794 aa)
med8Mediator of RNA polymerase II transcription subunit 8; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (270 aa)
LOC102225341cAMP responsive element modulator a. (111 aa)
LOC102222784TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (247 aa)
Med31Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (128 aa)
BACH1BTB domain and CNC homolog 1. (657 aa)
NR5A1Nuclear receptor subfamily 5 group A member 1. (452 aa)
bcl9lBcl9 like. (1406 aa)
M3ZZL9_XIPMAE2F transcription factor 5. (159 aa)
med17Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (643 aa)
taf6lTAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. (639 aa)
LOC102232234Activating transcription factor 4a. (424 aa)
nfe2Nuclear factor, erythroid 2. (477 aa)
M4A191_XIPMAUncharacterized protein; Belongs to the PI3/PI4-kinase family. (360 aa)
pou2af1Uncharacterized protein. (303 aa)
smad9Mothers against decapentaplegic homolog. (467 aa)
med4Mediator of RNA polymerase II transcription subunit 4; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (266 aa)
ARNTL2Aryl hydrocarbon receptor nuclear translocator like 2. (640 aa)
stat3Signal transducer and activator of transcription. (787 aa)
hltfHelicase-like transcription factor. (962 aa)
LOC106699913THAP-type domain-containing protein. (383 aa)
LOC102233582TATA-box binding protein associated factor 4. (934 aa)
e2f8E2F transcription factor 8. (855 aa)
nkx2-5NK2 homeobox 5. (319 aa)
atf7Cyclic AMP-dependent transcription factor ATF-7; Plays important functions in early cell signaling. Binds the cAMP response element (CRE) (consensus: 5'-GTGACGT[AG][AG]-3'), a sequence present in many viral and cellular promoters. (488 aa)
fam76bTranscription initiation factor TFIID subunit. (1867 aa)
drap1DR1-associated protein 1 (negative cofactor 2 alpha). (224 aa)
tfdp1Transcription factor. (410 aa)
LOC102224223D site albumin promoter binding protein b. (371 aa)
taf6TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (637 aa)
gtf2e2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (287 aa)
LOC102218641HMG box domain-containing protein. (371 aa)
LOC102232468Activating transcription factor 5b. (470 aa)
LOC102216582Activating transcription factor 5a. (505 aa)
e2f2Si:ch211-160f23.5. (472 aa)
MAFGMAF bZIP transcription factor G. (207 aa)
fosl1FOS-like antigen 1a. (337 aa)
atf6Activating transcription factor 6. (645 aa)
taf7lTAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (362 aa)
mnat1MNAT1 component of CDK activating kinase. (291 aa)
gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (464 aa)
gtf2f1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (497 aa)
RXRBRetinoid X receptor beta. (469 aa)
MAXMYC associated factor X. (150 aa)
med18Mediator of RNA polymerase II transcription subunit 18; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (209 aa)
tbpTATA box binding protein. (304 aa)
LOC102218843cAMP responsive element binding protein 3-like 3 like. (507 aa)
LOC102224043TAFH domain-containing protein. (1023 aa)
taf11TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (208 aa)
taf3TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto. (939 aa)
rfx5Regulatory factor X, 5. (691 aa)
ddit3DNA-damage-inducible transcript 3. (311 aa)
med14Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1435 aa)
ascc2Activating signal cointegrator 1 complex subunit 2. (765 aa)
taf10Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (186 aa)
cebpdCCAAT/enhancer-binding protein. (265 aa)
LOC102237417JunB proto-oncogene, AP-1 transcription factor subunit a. (330 aa)
taf13TATA-box binding protein associated factor 13. (125 aa)
ascl1Achaete-scute family bHLH transcription factor 1a. (199 aa)
LOC102227508CCAAT enhancer binding protein beta. (287 aa)
CebpgCCAAT enhancer binding protein gamma. (128 aa)
cebpaCCAAT/enhancer-binding protein. (297 aa)
M4AZP2_XIPMAAchaete-scute family bHLH transcription factor 1b. (179 aa)
JUNDBZIP domain-containing protein. (314 aa)
smad2Mothers against decapentaplegic homolog. (474 aa)
LOC102231606General transcription factor IIA, 1-like. (434 aa)
ccnhCyclin H; Belongs to the cyclin family. (319 aa)
LOC102225323Mothers against decapentaplegic homolog. (563 aa)
LOC102222672Si:ch211-153j24.3. (431 aa)
LOC106699687Uncharacterized protein. (724 aa)
atf2Activating transcription factor 2. (521 aa)
LOC102227900Mothers against decapentaplegic homolog. (472 aa)
ENSXMAP00000023172Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. (288 aa)
LOC102237941Cyclic AMP-dependent transcription factor ATF-7; Plays important functions in early cell signaling. Binds the cAMP response element (CRE) (consensus: 5'-GTGACGT[AG][AG]-3'), a sequence present in many viral and cellular promoters. (504 aa)
gemin5Gem (nuclear organelle) associated protein 5. (1445 aa)
LOC102221737cAMP responsive element binding protein 1. (317 aa)
LOC102225341-2KID domain-containing protein. (223 aa)
med1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1745 aa)
LOC102220925TAFH domain-containing protein. (919 aa)
ENSXMAP00000025895CCAAT/enhancer binding protein (C/EBP) 1. (155 aa)
pygo2Pygopus homolog 2 (Drosophila). (583 aa)
nfe2l2Nuclear factor, erythroid 2-like 2a. (617 aa)
TAF4TATA-box binding protein associated factor 4. (853 aa)
LOC102222838Basic leucine zipper transcription factor, ATF-like 3. (116 aa)
LOC102237376D site albumin promoter binding protein a. (377 aa)
LOC102226161Uncharacterized protein. (203 aa)
LOC102222228Uncharacterized protein. (476 aa)
LOC102229614Neuronal PAS domain protein 2. (880 aa)
trip4Thyroid hormone receptor interactor 4. (573 aa)
LOC102218909Retinoid x receptor, beta b. (444 aa)
taf2TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (1221 aa)
taf5lTAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. (601 aa)
gtf2bGeneral transcription factor IIB. (318 aa)
e2f3E2F transcription factor 3. (446 aa)
CLOCKClock circadian regulator a. (835 aa)
ENSXMAP00000029551E2F_CC-MB domain-containing protein. (137 aa)
lef1Lymphoid enhancer-binding factor 1. (379 aa)
stat4Signal transducer and activator of transcription. (738 aa)
nfybNuclear transcription factor Y, beta a. (205 aa)
LOC102218999TFIIS N-terminal domain-containing protein. (611 aa)
LOC102219340Clock circadian regulator b. (928 aa)
ENSXMAP00000030259HMG box domain-containing protein. (227 aa)
LOC102230421Nuclear receptor subfamily 5, group A, member 1a. (486 aa)
rb1Retinoblastoma susceptibility protein. (912 aa)
SMAD4Mothers against decapentaplegic homolog. (512 aa)
tcf7l2Transcription factor 7 like 2. (637 aa)
adnpActivity-dependent neuroprotector homeobox b. (1055 aa)
ENSXMAP00000031638General transcription factor IIA, 2. (71 aa)
hlfBZIP domain-containing protein. (353 aa)
tcf7Transcription factor 7. (528 aa)
smad1Mothers against decapentaplegic homolog. (496 aa)
ENSXMAP00000032804BZIP domain-containing protein. (108 aa)
med9Mediator of RNA polymerase II transcription subunit 9; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (101 aa)
med6Mediator complex subunit 6. (287 aa)
nfatc2Nuclear factor of activated T cells 2a. (891 aa)
ercc2Excision repair cross-complementation group 2. (760 aa)
nr5a2Nuclear receptor subfamily 5, group A, member 2. (523 aa)
LOC102216515BTB domain-containing protein. (764 aa)
ENSXMAP00000033891BZIP domain-containing protein. (90 aa)
rfxankRegulatory factor X-associated ankyrin-containing protein. (230 aa)
LOC102226672HLF transcription factor, PAR bZIP family member b. (298 aa)
HAND1Heart and neural crest derivatives expressed 1. (194 aa)
ASCL4Achaete-scute family bHLH transcription factor 4. (188 aa)
ASCL5Achaete-scute family bHLH transcription factor 5. (167 aa)
maxMyc associated factor X. (176 aa)
nfyaNuclear transcription factor Y, alpha, like. (351 aa)
cbfbCore-binding factor subunit beta. (188 aa)
ENSXMAP00000036268E2F_TDP domain-containing protein. (87 aa)
taf12TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (174 aa)
ENSXMAP00000036812E2F_CC-MB domain-containing protein. (224 aa)
ENSXMAP00000036885E2F_TDP domain-containing protein. (102 aa)
rfxapRegulatory factor X-associated protein. (215 aa)
smad7Mothers against decapentaplegic homolog. (378 aa)
gtf2a1General transcription factor IIA, 1. (391 aa)
gtf2e1General transcription factor IIE, polypeptide 1, alpha. (447 aa)
LOC102216993Aryl hydrocarbon receptor nuclear translocator-like 1a. (635 aa)
LOC102220945V-maf avian musculoaponeurotic fibrosarcoma oncogene homolog Ga. (162 aa)
LOC102217136General transcription factor IIH subunit. (392 aa)
nfycNuclear transcription factor Y, gamma. (363 aa)
bach2BTB and CNC homology 1, basic leucine zipper transcription factor 2b. (835 aa)
creb1Uncharacterized protein. (351 aa)
nr1h3Nuclear receptor subfamily 1, group H, member 3. (464 aa)
atf3Activating transcription factor 3. (209 aa)
gtf2h3General transcription factor IIH, polypeptide 3. (312 aa)
supt3hSPT3 homolog, SAGA and STAGA complex component. (357 aa)
ENSXMAP00000040652Uncharacterized protein. (176 aa)
SMAD3Mothers against decapentaplegic homolog. (425 aa)
ENSXMAP00000041178E2F transcription factor 5. (149 aa)
LOC102223022V-fos FBJ murine osteosarcoma viral oncogene homolog Aa. (381 aa)
ENSXMAP00000041640Si:dkey-23i12.7. (128 aa)
cebpzCCAAT enhancer binding protein zeta. (960 aa)
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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