23 items (Xiphophorus maculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	lrrk2	Leucine-rich repeat kinase 2. (2328 aa)
	LOC102222546	Protein phosphatase 1, regulatory subunit 15B. (548 aa)
	pdx1	Pancreatic and duodenal homeobox 1. (255 aa)
	LOC102218843	cAMP responsive element binding protein 3-like 3 like. (507 aa)
	LOC102220803	Wolfram syndrome 1a (wolframin). (1039 aa)
	BFAR	Bifunctional apoptosis regulator. (559 aa)
	lpcat3	Lysophosphatidylcholine acyltransferase 3; Belongs to the membrane-bound acyltransferase family. (464 aa)
	hspa5	Heat shock protein 5; Belongs to the heat shock protein 70 family. (652 aa)
	wfs1	Wolfram syndrome 1b (wolframin). (964 aa)
	xbp1	X-box binding protein 1. (263 aa)
	AQP11	Aquaporin; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes. (271 aa)
	usp14	Ubiquitin carboxyl-terminal hydrolase. (491 aa)
	ENSXMAP00000032446	Ubiquitin-like domain-containing protein. (138 aa)
	ENSXMAP00000038106	Parkin RBR E3 ubiquitin protein ligase. (257 aa)
	nck2	Cytoplasmic protein. (396 aa)
	nr1h3	Nuclear receptor subfamily 1, group H, member 3. (464 aa)
	txndc12	Thioredoxin domain containing 12 (endoplasmic reticulum). (180 aa)
	LOC102230185	DnaJ heat shock protein family (Hsp40) member B9b. (286 aa)
	nck1	Cytoplasmic protein. (394 aa)
	ddrgk1	Uncharacterized protein. (293 aa)
	svip	Si:ch73-147o17.1. (110 aa)
	LOC102235626	DnaJ heat shock protein family (Hsp40) member B9a. (212 aa)
	ufl1	UFM1-specific ligase 1. (792 aa)

Your Current Organism:

Xiphophorus maculatus

NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSXMAP00000032446	lrrk2	ENSXMAP00000032446	ENSXMAP00000022786	Ubiquitin-like domain-containing protein.	Leucine-rich repeat kinase 2.	0.502
ENSXMAP00000038106	lrrk2	ENSXMAP00000038106	ENSXMAP00000022786	Parkin RBR E3 ubiquitin protein ligase.	Leucine-rich repeat kinase 2.	0.502
LOC102220803	wfs1	ENSXMAP00000012386	ENSXMAP00000004460	Wolfram syndrome 1a (wolframin).	Wolfram syndrome 1b (wolframin).	0.902
LOC102220803	xbp1	ENSXMAP00000012386	ENSXMAP00000002668	Wolfram syndrome 1a (wolframin).	X-box binding protein 1.	0.603
LOC102222546	hspa5	ENSXMAP00000021243	ENSXMAP00000005698	Protein phosphatase 1, regulatory subunit 15B.	Heat shock protein 5; Belongs to the heat shock protein 70 family.	0.408
LOC102222546	xbp1	ENSXMAP00000021243	ENSXMAP00000002668	Protein phosphatase 1, regulatory subunit 15B.	X-box binding protein 1.	0.414
LOC102230185	hspa5	ENSXMAP00000029098	ENSXMAP00000005698	DnaJ heat shock protein family (Hsp40) member B9b.	Heat shock protein 5; Belongs to the heat shock protein 70 family.	0.881
LOC102230185	xbp1	ENSXMAP00000029098	ENSXMAP00000002668	DnaJ heat shock protein family (Hsp40) member B9b.	X-box binding protein 1.	0.620
LOC102235626	hspa5	ENSXMAP00000026007	ENSXMAP00000005698	DnaJ heat shock protein family (Hsp40) member B9a.	Heat shock protein 5; Belongs to the heat shock protein 70 family.	0.879
LOC102235626	xbp1	ENSXMAP00000026007	ENSXMAP00000002668	DnaJ heat shock protein family (Hsp40) member B9a.	X-box binding protein 1.	0.620
ddrgk1	ufl1	ENSXMAP00000030140	ENSXMAP00000024544	Uncharacterized protein.	UFM1-specific ligase 1.	0.943
hspa5	LOC102222546	ENSXMAP00000005698	ENSXMAP00000021243	Heat shock protein 5; Belongs to the heat shock protein 70 family.	Protein phosphatase 1, regulatory subunit 15B.	0.408
hspa5	LOC102230185	ENSXMAP00000005698	ENSXMAP00000029098	Heat shock protein 5; Belongs to the heat shock protein 70 family.	DnaJ heat shock protein family (Hsp40) member B9b.	0.881
hspa5	LOC102235626	ENSXMAP00000005698	ENSXMAP00000026007	Heat shock protein 5; Belongs to the heat shock protein 70 family.	DnaJ heat shock protein family (Hsp40) member B9a.	0.879
hspa5	xbp1	ENSXMAP00000005698	ENSXMAP00000002668	Heat shock protein 5; Belongs to the heat shock protein 70 family.	X-box binding protein 1.	0.744
lpcat3	svip	ENSXMAP00000011217	ENSXMAP00000030938	Lysophosphatidylcholine acyltransferase 3; Belongs to the membrane-bound acyltransferase family.	Si:ch73-147o17.1.	0.412
lrrk2	ENSXMAP00000032446	ENSXMAP00000022786	ENSXMAP00000032446	Leucine-rich repeat kinase 2.	Ubiquitin-like domain-containing protein.	0.502
lrrk2	ENSXMAP00000038106	ENSXMAP00000022786	ENSXMAP00000038106	Leucine-rich repeat kinase 2.	Parkin RBR E3 ubiquitin protein ligase.	0.502
nck1	nck2	ENSXMAP00000027526	ENSXMAP00000038600	Cytoplasmic protein.	Cytoplasmic protein.	0.901
nck2	nck1	ENSXMAP00000038600	ENSXMAP00000027526	Cytoplasmic protein.	Cytoplasmic protein.	0.901