STRINGSTRING
lrrk2 lrrk2 LOC102222546 LOC102222546 pdx1 pdx1 LOC102218843 LOC102218843 LOC102220803 LOC102220803 BFAR BFAR lpcat3 lpcat3 hspa5 hspa5 wfs1 wfs1 xbp1 xbp1 AQP11 AQP11 usp14 usp14 ENSXMAP00000032446 ENSXMAP00000032446 ENSXMAP00000038106 ENSXMAP00000038106 nck2 nck2 nr1h3 nr1h3 txndc12 txndc12 LOC102230185 LOC102230185 nck1 nck1 ddrgk1 ddrgk1 svip svip LOC102235626 LOC102235626 ufl1 ufl1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lrrk2Leucine-rich repeat kinase 2. (2328 aa)
LOC102222546Protein phosphatase 1, regulatory subunit 15B. (548 aa)
pdx1Pancreatic and duodenal homeobox 1. (255 aa)
LOC102218843cAMP responsive element binding protein 3-like 3 like. (507 aa)
LOC102220803Wolfram syndrome 1a (wolframin). (1039 aa)
BFARBifunctional apoptosis regulator. (559 aa)
lpcat3Lysophosphatidylcholine acyltransferase 3; Belongs to the membrane-bound acyltransferase family. (464 aa)
hspa5Heat shock protein 5; Belongs to the heat shock protein 70 family. (652 aa)
wfs1Wolfram syndrome 1b (wolframin). (964 aa)
xbp1X-box binding protein 1. (263 aa)
AQP11Aquaporin; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes. (271 aa)
usp14Ubiquitin carboxyl-terminal hydrolase. (491 aa)
ENSXMAP00000032446Ubiquitin-like domain-containing protein. (138 aa)
ENSXMAP00000038106Parkin RBR E3 ubiquitin protein ligase. (257 aa)
nck2Cytoplasmic protein. (396 aa)
nr1h3Nuclear receptor subfamily 1, group H, member 3. (464 aa)
txndc12Thioredoxin domain containing 12 (endoplasmic reticulum). (180 aa)
LOC102230185DnaJ heat shock protein family (Hsp40) member B9b. (286 aa)
nck1Cytoplasmic protein. (394 aa)
ddrgk1Uncharacterized protein. (293 aa)
svipSi:ch73-147o17.1. (110 aa)
LOC102235626DnaJ heat shock protein family (Hsp40) member B9a. (212 aa)
ufl1UFM1-specific ligase 1. (792 aa)
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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