STRINGSTRING
tipin tipin lig3 lig3 timeless timeless gmnn gmnn ZNF830 ZNF830 fbh1 fbh1 SMARCAL1 SMARCAL1 zranb3 zranb3 DONSON DONSON brca2 brca2 fbxo5 fbxo5 cdt1 cdt1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tipinTIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. (290 aa)
lig3DNA ligase. (998 aa)
timelessTimeless circadian clock. (1260 aa)
gmnnGeminin DNA replication inhibitor. (216 aa)
ZNF830Zinc finger protein 830. (335 aa)
fbh1F-box DNA helicase 1. (1056 aa)
SMARCAL1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily. (930 aa)
zranb3Zinc finger, RAN-binding domain containing 3. (1095 aa)
DONSONDownstream neighbor of SON. (584 aa)
brca2BRCA2 DNA repair associated. (3052 aa)
fbxo5F-box protein 5. (409 aa)
cdt1Chromatin licensing and DNA replication factor 1. (761 aa)
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
Server load: low (18%) [HD]