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LOC102219615 LOC102219615 ctu1 ctu1 etfa etfa lars1 lars1 mars2 mars2 vars2 vars2 LOC102224933 LOC102224933 LOC102226393 LOC102226393 ASS1 ASS1 asnsd1 asnsd1 LOC102234752 LOC102234752 trmu trmu flad1 flad1 LOC102234506 LOC102234506 LOC102226488 LOC102226488 nmnat2 nmnat2 dph6 dph6 yars2 yars2 lars2 lars2 vars1 vars1 nmnat1 nmnat1 eprs1 eprs1 PCYT2 PCYT2 pcyt2 pcyt2 LOC102232461 LOC102232461 M4AID8_XIPMA M4AID8_XIPMA ctu2 ctu2 ears2 ears2 coasy coasy rars1 rars1 qars1 qars1 yars1 yars1 asns asns rars2 rars2 gmps gmps LOC102223115 LOC102223115 iars1 iars1 iars2 iars2 LOC102233219 LOC102233219 LOC102233739 LOC102233739 cars2 cars2 wars1 wars1 LOC102223556 LOC102223556 papss1 papss1 etfb etfb LOC102227920 LOC102227920 pcyt1b pcyt1b ENSXMAP00000035480 ENSXMAP00000035480 mars1 mars1 wars2 wars2 nadsyn1 nadsyn1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC102219615Cryptochrome circadian regulator 1b. (574 aa)
ctu1Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. (343 aa)
etfaElectron transfer flavoprotein subunit alpha. (333 aa)
lars1Leucyl-tRNA synthetase b; Belongs to the class-I aminoacyl-tRNA synthetase family. (1184 aa)
mars2Methionyl-tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family. (594 aa)
vars2Valyl-tRNA synthetase 2, mitochondrial (putative); Belongs to the class-I aminoacyl-tRNA synthetase family. (1080 aa)
LOC102224933Si:ch1073-390k14.1. (761 aa)
LOC102226393Zgc:66475. (506 aa)
ASS1Argininosuccinate synthase 1. (412 aa)
asnsd1Asparagine synthetase domain containing 1. (588 aa)
LOC102234752Cryptochrome circadian regulator 2. (656 aa)
trmutRNA 5-methylaminomethyl-2-thiouridylate methyltransferase. (416 aa)
flad1Flavin adenine dinucleotide synthetase 1. (500 aa)
LOC102234506Cryptochrome DASH. (521 aa)
LOC102226488Cryptochrome circadian regulator 3a. (658 aa)
nmnat2Nicotinamide nucleotide adenylyltransferase 2. (307 aa)
dph6Diphthamine biosynthesis 6. (693 aa)
yars2Tyrosine--tRNA ligase. (480 aa)
lars2Leucyl-tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family. (904 aa)
vars1Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (1274 aa)
nmnat1Nicotinamide-nucleotide adenylyltransferase. (275 aa)
eprs1Glutamyl-prolyl-tRNA synthetase. (1669 aa)
PCYT2Phosphate cytidylyltransferase 2, ethanolamine. (404 aa)
pcyt2Phosphate cytidylyltransferase 2, ethanolamine. (403 aa)
LOC1022324613'-phosphoadenosine 5'-phosphosulfate synthase 2a. (615 aa)
M4AID8_XIPMAtRNA-synt_1e domain-containing protein. (224 aa)
ctu2Cytoplasmic tRNA 2-thiolation protein 2; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). May act by forming a heterodimer with CTU1/ATPBD3 that ligates sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. (495 aa)
ears2Glutamyl-tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family. (543 aa)
coasyCoA synthase. (557 aa)
rars1Arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (660 aa)
qars1Glutaminyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (776 aa)
yars1Tyrosine--tRNA ligase. (616 aa)
asnsAsparagine synthetase [glutamine-hydrolyzing]. (561 aa)
rars2Arginyl-tRNA synthetase 2, mitochondrial (putative); Belongs to the class-I aminoacyl-tRNA synthetase family. (579 aa)
gmpsGuanine monophosphate synthase. (690 aa)
LOC102223115Photolyase/cryptochrome alpha/beta domain-containing protein. (625 aa)
iars1Isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (1314 aa)
iars2Isoleucyl-tRNA synthetase 2, mitochondrial. (1037 aa)
LOC102233219Nicotinamide-nucleotide adenylyltransferase. (265 aa)
LOC102233739Phosphate cytidylyltransferase 1, choline, alpha a. (380 aa)
cars2Cysteinyl-tRNA synthetase 2, mitochondrial. (552 aa)
wars1Tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (430 aa)
LOC102223556Phosphate cytidylyltransferase 1, choline, beta b. (356 aa)
papss13'-phosphoadenosine 5'-phosphosulfate synthase 1. (624 aa)
etfbElectron transfer flavoprotein subunit beta. (254 aa)
LOC102227920Cryptochrome circadian regulator 5. (522 aa)
pcyt1bPhosphate cytidylyltransferase 1, choline, beta a. (361 aa)
ENSXMAP00000035480tRNA-synt_1e domain-containing protein. (70 aa)
mars1Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (921 aa)
wars2Tryptophanyl tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family. (365 aa)
nadsyn1Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family. (663 aa)
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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