(9 nodes) Ubiquitin conserved site network (Xiphophorus maculatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102235594	NEDD8 ubiquitin like modifier. (79 aa)
	LOC102235073	Ubiquitin like 4A. (156 aa)
	Uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (355 aa)
	LOC102229617	Ubiquitin-like domain-containing protein. (83 aa)
	ubb	Ubiquitin B. (838 aa)
	usp14	Ubiquitin carboxyl-terminal hydrolase. (491 aa)
	ubfd1	Ubiquitin family domain containing 1. (289 aa)
	ENSXMAP00000036141	Ubiquitin-like domain-containing protein. (75 aa)
	rps27a	Ribosomal protein S27a. (156 aa)

Your Current Organism:

Xiphophorus maculatus

NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSXMAP00000036141	LOC102229617	ENSXMAP00000036141	ENSXMAP00000020508	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.862
ENSXMAP00000036141	LOC102235073	ENSXMAP00000036141	ENSXMAP00000001012	Ubiquitin-like domain-containing protein.	Ubiquitin like 4A.	0.839
ENSXMAP00000036141	LOC102235594	ENSXMAP00000036141	ENSXMAP00000000464	Ubiquitin-like domain-containing protein.	NEDD8 ubiquitin like modifier.	0.863
ENSXMAP00000036141	rps27a	ENSXMAP00000036141	ENSXMAP00000000166	Ubiquitin-like domain-containing protein.	Ribosomal protein S27a.	0.994
ENSXMAP00000036141	ubb	ENSXMAP00000036141	ENSXMAP00000023177	Ubiquitin-like domain-containing protein.	Ubiquitin B.	0.964
ENSXMAP00000036141	ubfd1	ENSXMAP00000036141	ENSXMAP00000034212	Ubiquitin-like domain-containing protein.	Ubiquitin family domain containing 1.	0.758
ENSXMAP00000036141	usp14	ENSXMAP00000036141	ENSXMAP00000031730	Ubiquitin-like domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.935
LOC102229617	ENSXMAP00000036141	ENSXMAP00000020508	ENSXMAP00000036141	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.862
LOC102229617	LOC102235073	ENSXMAP00000020508	ENSXMAP00000001012	Ubiquitin-like domain-containing protein.	Ubiquitin like 4A.	0.579
LOC102229617	Uba52	ENSXMAP00000020508	ENSXMAP00000003931	Ubiquitin-like domain-containing protein.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.924
LOC102229617	rps27a	ENSXMAP00000020508	ENSXMAP00000000166	Ubiquitin-like domain-containing protein.	Ribosomal protein S27a.	0.917
LOC102229617	ubb	ENSXMAP00000020508	ENSXMAP00000023177	Ubiquitin-like domain-containing protein.	Ubiquitin B.	0.817
LOC102229617	ubfd1	ENSXMAP00000020508	ENSXMAP00000034212	Ubiquitin-like domain-containing protein.	Ubiquitin family domain containing 1.	0.581
LOC102229617	usp14	ENSXMAP00000020508	ENSXMAP00000031730	Ubiquitin-like domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.670
LOC102235073	ENSXMAP00000036141	ENSXMAP00000001012	ENSXMAP00000036141	Ubiquitin like 4A.	Ubiquitin-like domain-containing protein.	0.839
LOC102235073	LOC102229617	ENSXMAP00000001012	ENSXMAP00000020508	Ubiquitin like 4A.	Ubiquitin-like domain-containing protein.	0.579
LOC102235073	LOC102235594	ENSXMAP00000001012	ENSXMAP00000000464	Ubiquitin like 4A.	NEDD8 ubiquitin like modifier.	0.579
LOC102235073	Uba52	ENSXMAP00000001012	ENSXMAP00000003931	Ubiquitin like 4A.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.801
LOC102235073	rps27a	ENSXMAP00000001012	ENSXMAP00000000166	Ubiquitin like 4A.	Ribosomal protein S27a.	0.786
LOC102235073	ubfd1	ENSXMAP00000001012	ENSXMAP00000034212	Ubiquitin like 4A.	Ubiquitin family domain containing 1.	0.619