STRINGSTRING
LOC102233367 LOC102233367 LOC102216805 LOC102216805 LOC102238122 LOC102238122 slc8a1 slc8a1 frem1 frem1 LOC102224098 LOC102224098 slc8a3 slc8a3 LOC102233577 LOC102233577 LOC102234891 LOC102234891 itgb4 itgb4 frem3 frem3 frem2 frem2 LOC102226984 LOC102226984 fras1 fras1 adgrv1 adgrv1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC102233367Fras1 related extracellular matrix 1b. (2119 aa)
LOC102216805Solute carrier family 8 member 1a; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (957 aa)
LOC102238122Solute carrier family 8 member 4a; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (946 aa)
slc8a1Solute carrier family 8 member 1b; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (960 aa)
frem1Fras1 related extracellular matrix 1a. (2015 aa)
LOC102224098Solute carrier family 8 member 2b; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (1052 aa)
slc8a3Solute carrier family 8 member 3; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (925 aa)
LOC102233577Solute carrier family 8 member 4b; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (952 aa)
LOC102234891Uncharacterized protein; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (926 aa)
itgb4Integrin beta. (1812 aa)
frem3Fras1 related extracellular matrix 3. (3140 aa)
frem2FRAS1 related extracellular matrix 2a. (3120 aa)
LOC102226984FRAS1 related extracellular matrix 2b. (3114 aa)
fras1Fraser extracellular matrix complex subunit 1. (4000 aa)
adgrv1Adhesion G protein-coupled receptor V1. (5852 aa)
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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