19 items (Xiphophorus maculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102233398	Uncharacterized protein. (892 aa)
	lin37	Lin-37 DREAM MuvB core complex component. (241 aa)
	ENSXMAP00000041178	E2F transcription factor 5. (149 aa)
	dyrk1a	Dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b. (713 aa)
	lin52	Lin-52 DREAM MuvB core complex component. (112 aa)
	ccne2	Cyclin E2; Belongs to the cyclin family. (394 aa)
	lin54	Lin-54 DREAM MuvB core complex component. (796 aa)
	rbl1	Retinoblastoma-like 1 (p107). (1055 aa)
	tfdp1	Transcription factor. (410 aa)
	ccna1	Cyclin A1; Belongs to the cyclin family. (401 aa)
	mybl2	V-myb avian myeloblastosis viral oncogene homolog-like 2b. (629 aa)
	M3ZZL9_XIPMA	E2F transcription factor 5. (159 aa)
	lin9	Lin-9 DREAM MuvB core complex component. (547 aa)
	LOC102225329	Retinoblastoma-like 2 (p130). (1063 aa)
	LOC102234999	Dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B. (719 aa)
	cdk2	Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily. (298 aa)
	ccna2	Cyclin A2; Belongs to the cyclin family. (432 aa)
	e2f4	E2F transcription factor 4. (389 aa)
	ccne1	Cyclin E1; Belongs to the cyclin family. (434 aa)

Your Current Organism:

Xiphophorus maculatus

NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSXMAP00000041178	LOC102225329	ENSXMAP00000041178	ENSXMAP00000004694	E2F transcription factor 5.	Retinoblastoma-like 2 (p130).	0.984
ENSXMAP00000041178	LOC102233398	ENSXMAP00000041178	ENSXMAP00000027566	E2F transcription factor 5.	Uncharacterized protein.	0.444
ENSXMAP00000041178	M3ZZL9_XIPMA	ENSXMAP00000041178	ENSXMAP00000007663	E2F transcription factor 5.	E2F transcription factor 5.	0.651
ENSXMAP00000041178	ccna1	ENSXMAP00000041178	ENSXMAP00000008580	E2F transcription factor 5.	Cyclin A1; Belongs to the cyclin family.	0.663
ENSXMAP00000041178	ccna2	ENSXMAP00000041178	ENSXMAP00000002060	E2F transcription factor 5.	Cyclin A2; Belongs to the cyclin family.	0.663
ENSXMAP00000041178	ccne1	ENSXMAP00000041178	ENSXMAP00000001009	E2F transcription factor 5.	Cyclin E1; Belongs to the cyclin family.	0.655
ENSXMAP00000041178	ccne2	ENSXMAP00000041178	ENSXMAP00000021948	E2F transcription factor 5.	Cyclin E2; Belongs to the cyclin family.	0.655
ENSXMAP00000041178	cdk2	ENSXMAP00000041178	ENSXMAP00000003340	E2F transcription factor 5.	Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily.	0.557
ENSXMAP00000041178	e2f4	ENSXMAP00000041178	ENSXMAP00000001972	E2F transcription factor 5.	E2F transcription factor 4.	0.902
ENSXMAP00000041178	lin37	ENSXMAP00000041178	ENSXMAP00000041436	E2F transcription factor 5.	Lin-37 DREAM MuvB core complex component.	0.822
ENSXMAP00000041178	lin52	ENSXMAP00000041178	ENSXMAP00000028563	E2F transcription factor 5.	Lin-52 DREAM MuvB core complex component.	0.749
ENSXMAP00000041178	lin54	ENSXMAP00000041178	ENSXMAP00000019151	E2F transcription factor 5.	Lin-54 DREAM MuvB core complex component.	0.823
ENSXMAP00000041178	lin9	ENSXMAP00000041178	ENSXMAP00000007492	E2F transcription factor 5.	Lin-9 DREAM MuvB core complex component.	0.783
ENSXMAP00000041178	mybl2	ENSXMAP00000041178	ENSXMAP00000007974	E2F transcription factor 5.	V-myb avian myeloblastosis viral oncogene homolog-like 2b.	0.444
ENSXMAP00000041178	rbl1	ENSXMAP00000041178	ENSXMAP00000014637	E2F transcription factor 5.	Retinoblastoma-like 1 (p107).	0.984
ENSXMAP00000041178	tfdp1	ENSXMAP00000041178	ENSXMAP00000011702	E2F transcription factor 5.	Transcription factor.	0.985
LOC102225329	ENSXMAP00000041178	ENSXMAP00000004694	ENSXMAP00000041178	Retinoblastoma-like 2 (p130).	E2F transcription factor 5.	0.984
LOC102225329	LOC102233398	ENSXMAP00000004694	ENSXMAP00000027566	Retinoblastoma-like 2 (p130).	Uncharacterized protein.	0.486
LOC102225329	M3ZZL9_XIPMA	ENSXMAP00000004694	ENSXMAP00000007663	Retinoblastoma-like 2 (p130).	E2F transcription factor 5.	0.855
LOC102225329	ccna1	ENSXMAP00000004694	ENSXMAP00000008580	Retinoblastoma-like 2 (p130).	Cyclin A1; Belongs to the cyclin family.	0.749