27 items (Xiphophorus maculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102229921	Ribosomal protein S6 kinase. (775 aa)
	dusp6	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (389 aa)
	LOC102217254	Ribosomal protein S6 kinase. (783 aa)
	mapk1	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (364 aa)
	ppp2ca	Serine/threonine-protein phosphatase. (309 aa)
	LOC102223777	Serine/threonine-protein phosphatase. (309 aa)
	LOC102223674	Mitogen-activated protein kinase. (361 aa)
	ppp4r1	WRNPLPNID domain-containing protein. (970 aa)
	LOC102218102	Mitogen-activated protein kinase. (357 aa)
	mapk7	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (1064 aa)
	vrk3	VRK serine/threonine kinase 3. (527 aa)
	LOC102220269	Ribosomal protein S6 kinase. (794 aa)
	LOC102236340	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (366 aa)
	ppp2r1b	Protein phosphatase 2, regulatory subunit A, beta b. (589 aa)
	DUSP3	Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (219 aa)
	LOC102235687	Ribosomal protein S6 kinase. (769 aa)
	fnbp4	Formin binding protein 4. (877 aa)
	LOC102231047	Mitogen-activated protein kinase. (360 aa)
	relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing. (1189 aa)
	ppp4r4	Protein phosphatase 4, regulatory subunit 4. (908 aa)
	LOC102237032	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (511 aa)
	ppp2cb	Serine/threonine-protein phosphatase. (309 aa)
	elk1	ETS transcription factor ELK1. (527 aa)
	LOC102233752	Mitogen-activated protein kinase. (435 aa)
	dusp7	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (384 aa)
	mapk15	Mitogen-activated protein kinase. (611 aa)
	LOC102223324	Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (227 aa)

Your Current Organism:

Xiphophorus maculatus

NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DUSP3	LOC102218102	ENSXMAP00000017930	ENSXMAP00000010371	Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Mitogen-activated protein kinase.	0.780
DUSP3	LOC102223324	ENSXMAP00000017930	ENSXMAP00000040198	Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.901
DUSP3	LOC102223674	ENSXMAP00000017930	ENSXMAP00000010282	Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Mitogen-activated protein kinase.	0.780
DUSP3	LOC102231047	ENSXMAP00000017930	ENSXMAP00000021619	Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Mitogen-activated protein kinase.	0.780
DUSP3	LOC102233752	ENSXMAP00000017930	ENSXMAP00000034299	Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Mitogen-activated protein kinase.	0.780
DUSP3	LOC102237032	ENSXMAP00000017930	ENSXMAP00000028528	Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.945
DUSP3	mapk1	ENSXMAP00000017930	ENSXMAP00000006468	Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.945
DUSP3	mapk7	ENSXMAP00000017930	ENSXMAP00000013808	Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.476
DUSP3	vrk3	ENSXMAP00000017930	ENSXMAP00000014252	Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	VRK serine/threonine kinase 3.	0.550
LOC102217254	LOC102218102	ENSXMAP00000005281	ENSXMAP00000010371	Ribosomal protein S6 kinase.	Mitogen-activated protein kinase.	0.513
LOC102217254	LOC102223674	ENSXMAP00000005281	ENSXMAP00000010282	Ribosomal protein S6 kinase.	Mitogen-activated protein kinase.	0.513
LOC102217254	LOC102231047	ENSXMAP00000005281	ENSXMAP00000021619	Ribosomal protein S6 kinase.	Mitogen-activated protein kinase.	0.513
LOC102217254	LOC102233752	ENSXMAP00000005281	ENSXMAP00000034299	Ribosomal protein S6 kinase.	Mitogen-activated protein kinase.	0.513
LOC102217254	LOC102237032	ENSXMAP00000005281	ENSXMAP00000028528	Ribosomal protein S6 kinase.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.575
LOC102217254	mapk1	ENSXMAP00000005281	ENSXMAP00000006468	Ribosomal protein S6 kinase.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.575
LOC102217254	mapk15	ENSXMAP00000005281	ENSXMAP00000035828	Ribosomal protein S6 kinase.	Mitogen-activated protein kinase.	0.462
LOC102217254	mapk7	ENSXMAP00000005281	ENSXMAP00000013808	Ribosomal protein S6 kinase.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.575
LOC102218102	DUSP3	ENSXMAP00000010371	ENSXMAP00000017930	Mitogen-activated protein kinase.	Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.780
LOC102218102	LOC102217254	ENSXMAP00000010371	ENSXMAP00000005281	Mitogen-activated protein kinase.	Ribosomal protein S6 kinase.	0.513
LOC102218102	LOC102220269	ENSXMAP00000010371	ENSXMAP00000014403	Mitogen-activated protein kinase.	Ribosomal protein S6 kinase.	0.467