STRINGSTRING
otud7b otud7b tnfsf11 tnfsf11 fadd fadd tbk1 tbk1 LOC102228722 LOC102228722 RNF31 RNF31 LOC102230681 LOC102230681 LOC102227944 LOC102227944 rbck1 rbck1 LOC102233658 LOC102233658 LOC102236946 LOC102236946 LOC102217369 LOC102217369 LOC102221075 LOC102221075 LOC102231502 LOC102231502 birc2 birc2 LOC102217371 LOC102217371 tradd tradd ripk1 ripk1 LOC102226939 LOC102226939 otud1 otud1 usp4 usp4 LOC102217350 LOC102217350 mib2 mib2 LOC102230709 LOC102230709 LOC102220596 LOC102220596 LOC111608983 LOC111608983 sharpin sharpin tnfaip3 tnfaip3 spata2 spata2 tnfrsf1a tnfrsf1a cyld cyld
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
otud7bOTU deubiquitinase 7B. (912 aa)
tnfsf11TNF superfamily member 11; Belongs to the tumor necrosis factor family. (268 aa)
faddUncharacterized protein. (196 aa)
tbk1TANK-binding kinase 1. (721 aa)
LOC102228722Inhibitor of nuclear factor kappa B kinase subunit epsilon. (735 aa)
RNF31Ring finger protein 31. (1116 aa)
LOC102230681TNF superfamily member 10; Belongs to the tumor necrosis factor family. (280 aa)
LOC102227944TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (568 aa)
rbck1RanBP-type and C3HC4-type zinc finger containing 1. (515 aa)
LOC102233658Cylindromatosis (turban tumor syndrome), like; Belongs to the peptidase C19 family. (766 aa)
LOC102236946X-linked inhibitor of apoptosis. (401 aa)
LOC102217369Ubiquitin specific peptidase 21; Belongs to the peptidase C19 family. (372 aa)
LOC102221075TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (289 aa)
LOC102231502Cylindromatosis (turban tumor syndrome), b. (712 aa)
birc2Baculoviral IAP repeat containing 2. (642 aa)
LOC102217371Ubiquitin carboxyl-terminal hydrolase. (399 aa)
traddTnfrsf1a-associated via death domain. (293 aa)
ripk1Receptor (TNFRSF)-interacting serine-threonine kinase 1, like. (676 aa)
LOC102226939Sharpin and rbck1 related. (687 aa)
otud1OTU deubiquitinase 1. (386 aa)
usp4Ubiquitin specific peptidase 4 (proto-oncogene); Belongs to the peptidase C19 family. (1002 aa)
LOC102217350TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (597 aa)
mib2Mindbomb E3 ubiquitin protein ligase 2. (1027 aa)
LOC102230709Ubiquitin carboxyl-terminal hydrolase. (593 aa)
LOC102220596RING-type domain-containing protein. (398 aa)
LOC111608983Si:dkey-181m9.8. (478 aa)
sharpinSHANK-associated RH domain interacting protein. (435 aa)
tnfaip3Tumor necrosis factor, alpha-induced protein 3. (825 aa)
spata2Spermatogenesis associated 2. (566 aa)
tnfrsf1aTumor necrosis factor receptor superfamily, member 1a. (365 aa)
cyldCylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family. (952 aa)
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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