21 items (Xiphophorus maculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rabggtb	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (332 aa)
	LOC102232876	Uncharacterized protein. (606 aa)
	ndrg3	Ndrg family member 3a. (420 aa)
	ndrg4	NDRG family member 4. (437 aa)
	cryzl1	Crystallin, zeta (quinone reductase)-like 1. (346 aa)
	vat1l	Vesicle amine transport 1-like. (413 aa)
	LOC102221052	CHM Rab escort protein. (697 aa)
	Bcl2l14	Uncharacterized protein. (186 aa)
	LOC102235205	N-myc downstream regulated 1a. (386 aa)
	rtn4ip1	Reticulon 4 interacting protein 1. (403 aa)
	cryz	Crystallin, zeta (quinone reductase). (371 aa)
	ptar1	Protein prenyltransferase alpha subunit repeat containing 1. (456 aa)
	bcl6	BCL6A transcription repressor a. (745 aa)
	bcl6b	BCL6B transcription repressor. (534 aa)
	TP53I3	Tumor protein p53 inducible protein 3. (366 aa)
	LOC102230230	PKS_ER domain-containing protein. (415 aa)
	rabggta	Rab geranylgeranyltransferase subunit alpha. (585 aa)
	LOC102223542	Uncharacterized protein. (372 aa)
	ndrg2	NDRG family member 2. (396 aa)
	ZADH2	Zinc binding alcohol dehydrogenase domain containing 2. (405 aa)
	LOC102222094	Uncharacterized protein. (337 aa)

Your Current Organism:

Xiphophorus maculatus

NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102221052	ptar1	ENSXMAP00000029837	ENSXMAP00000018220	CHM Rab escort protein.	Protein prenyltransferase alpha subunit repeat containing 1.	0.953
LOC102221052	rabggta	ENSXMAP00000029837	ENSXMAP00000012693	CHM Rab escort protein.	Rab geranylgeranyltransferase subunit alpha.	0.984
LOC102221052	rabggtb	ENSXMAP00000029837	ENSXMAP00000022130	CHM Rab escort protein.	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	0.962
LOC102230230	ZADH2	ENSXMAP00000013696	ENSXMAP00000009038	PKS_ER domain-containing protein.	Zinc binding alcohol dehydrogenase domain containing 2.	0.425
LOC102232876	bcl6	ENSXMAP00000038665	ENSXMAP00000016489	Uncharacterized protein.	BCL6A transcription repressor a.	0.902
ZADH2	LOC102230230	ENSXMAP00000009038	ENSXMAP00000013696	Zinc binding alcohol dehydrogenase domain containing 2.	PKS_ER domain-containing protein.	0.425
ZADH2	cryzl1	ENSXMAP00000009038	ENSXMAP00000031690	Zinc binding alcohol dehydrogenase domain containing 2.	Crystallin, zeta (quinone reductase)-like 1.	0.690
bcl6	LOC102232876	ENSXMAP00000016489	ENSXMAP00000038665	BCL6A transcription repressor a.	Uncharacterized protein.	0.902
cryzl1	ZADH2	ENSXMAP00000031690	ENSXMAP00000009038	Crystallin, zeta (quinone reductase)-like 1.	Zinc binding alcohol dehydrogenase domain containing 2.	0.690
ptar1	LOC102221052	ENSXMAP00000018220	ENSXMAP00000029837	Protein prenyltransferase alpha subunit repeat containing 1.	CHM Rab escort protein.	0.953
ptar1	rabggtb	ENSXMAP00000018220	ENSXMAP00000022130	Protein prenyltransferase alpha subunit repeat containing 1.	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	0.977
rabggta	LOC102221052	ENSXMAP00000012693	ENSXMAP00000029837	Rab geranylgeranyltransferase subunit alpha.	CHM Rab escort protein.	0.984
rabggta	rabggtb	ENSXMAP00000012693	ENSXMAP00000022130	Rab geranylgeranyltransferase subunit alpha.	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	0.999
rabggtb	LOC102221052	ENSXMAP00000022130	ENSXMAP00000029837	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	CHM Rab escort protein.	0.962
rabggtb	ptar1	ENSXMAP00000022130	ENSXMAP00000018220	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	Protein prenyltransferase alpha subunit repeat containing 1.	0.977
rabggtb	rabggta	ENSXMAP00000022130	ENSXMAP00000012693	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	Rab geranylgeranyltransferase subunit alpha.	0.999