STRINGSTRING
col1a2 col1a2 LOC102233612 LOC102233612 LOC102229978 LOC102229978 LOC102236583 LOC102236583 LOC102236702 LOC102236702 gp1bb gp1bb col1a1 col1a1 LOC102229118 LOC102229118
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
col1a2Collagen, type I, alpha 2. (1354 aa)
LOC102233612Reticulon 4 receptor-like 2b. (460 aa)
LOC102229978Collagen, type I, alpha 1b. (1323 aa)
LOC102236583Reticulon 4 receptor-like 2 a. (455 aa)
LOC102236702Glycoprotein IX (platelet). (257 aa)
gp1bbGlycoprotein Ib platelet subunit beta. (206 aa)
col1a1Collagen, type I, alpha 1a. (1364 aa)
LOC102229118LRRNT domain-containing protein. (668 aa)
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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