104 items (Xiphophorus maculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rab24	RAB24, member RAS oncogene family. (203 aa)
	LOC102216962	Protein tyrosine phosphatase 4A2a. (168 aa)
	LOC102230820	RAB38c, member of RAS oncogene family. (260 aa)
	LOC102234827	RAB33A, member RAS oncogene family. (282 aa)
	rab39b	Uncharacterized protein. (213 aa)
	rab32	RAB32a, member RAS oncogene family. (213 aa)
	LOC102221458	RAB25, member RAS oncogene family a. (211 aa)
	rab8a	RAB8A, member RAS oncogene family. (206 aa)
	dnajc27	DnaJ (Hsp40) homolog, subfamily C, member 27. (273 aa)
	rab35	RAB35, member RAS oncogene family b. (184 aa)
	LOC102236194	RAB33B, member RAS oncogene family a. (240 aa)
	LOC102216538	Filamin A interacting protein 1b. (1151 aa)
	LOC102229334	RAB, member of RAS oncogene family-like 2. (223 aa)
	RAB40C	RAB40C, member RAS oncogene family. (297 aa)
	LOC102236184	Zgc:171927. (214 aa)
	rabl6	RAB, member RAS oncogene family-like 6b. (748 aa)
	rab14	Uncharacterized protein. (215 aa)
	LOC102231865	Uncharacterized protein. (203 aa)
	fam189a1	Uncharacterized protein. (806 aa)
	rab15	RAB15, member RAS oncogene family. (213 aa)
	M4A0I8_XIPMA	Uncharacterized protein. (295 aa)
	zhx2	Zinc fingers and homeoboxes 2a. (900 aa)
	rab23	RAB23, member RAS oncogene family. (235 aa)
	rab21	RAB21, member RAS oncogene family. (220 aa)
	LOC102231982	RAB3B, member RAS oncogene family. (217 aa)
	LOC102217081	Zgc:101559. (234 aa)
	rab6a	RAB6A, member RAS oncogene family. (208 aa)
	rabggta	Rab geranylgeranyltransferase subunit alpha. (585 aa)
	LOC102217855	RAB40c, member RAS oncogene family. (279 aa)
	LOC102237980	Uncharacterized protein. (223 aa)
	pter	Phosphotriesterase related. (349 aa)
	LOC102237419	RAB15, member RAS oncogene family. (210 aa)
	cgnl1	Cingulin-like 1. (1295 aa)
	LOC102235930	Protein tyrosine phosphatase 4A1. (167 aa)
	LOC102234551	Uncharacterized protein. (215 aa)
	LOC102218920	Uncharacterized protein. (202 aa)
	LOC102217653	RAB6B, member RAS oncogene family. (208 aa)
	rab13	Uncharacterized protein. (200 aa)
	fam189b	Si:dkey-7f3.9. (706 aa)
	LOC102221887	RAB36, member RAS oncogene family. (257 aa)
	LOC102223209	RAB6B, member RAS oncogene family a. (208 aa)
	LOC102218467	Uncharacterized protein. (250 aa)
	LOC102238335	Uncharacterized protein. (242 aa)
	LOC102230474	RAB38b, member of RAS oncogene family. (218 aa)
	armc5	Armadillo repeat containing 5. (1132 aa)
	ptar1	Protein prenyltransferase alpha subunit repeat containing 1. (456 aa)
	LOC102231034	TYR_PHOSPHATASE_2 domain-containing protein. (170 aa)
	RAB19	RAB19, member RAS oncogene family. (232 aa)
	RAB9A	RAB9A, member RAS oncogene family. (202 aa)
	LOC102230220	Uncharacterized protein. (4018 aa)
	LOC102237935	Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family. (429 aa)
	LOC102233168	Uncharacterized protein. (252 aa)
	LOC102231206	RAB34, member RAS oncogene family b. (212 aa)
	rabggtb	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (332 aa)
	LOC102228768	Protein tyrosine phosphatase 4A2b. (173 aa)
	rab3c	RAB3C, member RAS oncogene family. (225 aa)
	LOC102219790	RAB7a, member RAS oncogene family. (207 aa)
	garem1	GRB2 associated, regulator of MAPK1. (869 aa)
	rab8b	Multiple EGF-like-domains 8. (207 aa)
	rab18	RAB18A, member RAS oncogene family. (204 aa)
	LOC102220727	RAB42, member RAS oncogene family a. (218 aa)
	RAB29	RAB29, member RAS oncogene family. (206 aa)
	LOC102227378	RAB18B, member RAS oncogene family. (205 aa)
	rab12	RAB12, member RAS oncogene family. (244 aa)
	LOC102232359	Uncharacterized protein. (1042 aa)
	rab34	RAB34, member RAS oncogene family a. (266 aa)
	rab5c	RAB5C, member RAS oncogene family. (220 aa)
	rab2a	RAB2A, member RAS oncogene family. (212 aa)
	LOC102228872	Si:dkey-34d22.5. (222 aa)
	LOC102221989	RAB5A, member RAS oncogene family, a. (216 aa)
	rab3a	RAB3A, member RAS oncogene family, b. (219 aa)
	rab11a	RAB11a, member RAS oncogene family. (262 aa)
	LOC102221575	RAB4B, member RAS oncogene family. (239 aa)
	LOC102221052	CHM Rab escort protein. (697 aa)
	LOC102225470	RAB40B, member RAS oncogene family. (291 aa)
	LOC102228070	Zgc:162171. (227 aa)
	rab28	Uncharacterized protein. (277 aa)
	RAB31	RAB31, member RAS oncogene family. (194 aa)
	LOC102221039	Si:dkey-13a21.4. (204 aa)
	LOC102218001	Zgc:162879. (693 aa)
	ENSXMAP00000031702	Uncharacterized protein. (240 aa)
	LOC102216514	Uncharacterized protein. (229 aa)
	LOC102226755	Si:dkey-16l2.16. (209 aa)
	rab20	RAB20, member RAS oncogene family. (269 aa)
	LOC102231109	Uncharacterized protein. (223 aa)
	LOC102230535	Uncharacterized protein. (207 aa)
	rab4a	RAB4a, member RAS oncogene family. (213 aa)
	rab10	RAB10, member RAS oncogene family. (208 aa)
	LOC102233132	RAB5A, member RAS oncogene family, b. (216 aa)
	rasef	RAS and EF-hand domain containing. (785 aa)
	rab22a	RAB22A, member RAS oncogene family. (194 aa)
	LOC102236931	ZRAB1B, member RAS oncogene family a. (201 aa)
	RAB41	RAB41, member RAS oncogene family. (211 aa)
	LOC102219409	RAB8A, member RAS oncogene family. (206 aa)
	rab25	RAB25, member RAS oncogene family b. (209 aa)
	rab27a	RAB27A, member RAS oncogene family. (220 aa)
	rab30	RAB30, member RAS oncogene family. (203 aa)
	RAB38	RAB38, member RAS oncogene family. (238 aa)
	LOC102218510	RAB11B, member RAS oncogene family, b. (218 aa)
	LOC102236307	Uncharacterized protein. (218 aa)
	LOC102219022	RAB11B, member RAS oncogene family, a. (249 aa)
	LOC102228627	RAB3D, member RAS oncogene family, b. (221 aa)
	LOC102224939	RAB5B, member RAS oncogene family. (216 aa)
	LOC102230863	Uncharacterized protein. (189 aa)

Your Current Organism:

Xiphophorus maculatus

NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSXMAP00000031702	LOC102217653	ENSXMAP00000031702	ENSXMAP00000015942	Uncharacterized protein.	RAB6B, member RAS oncogene family.	0.435
ENSXMAP00000031702	LOC102218510	ENSXMAP00000031702	ENSXMAP00000039862	Uncharacterized protein.	RAB11B, member RAS oncogene family, b.	0.427
ENSXMAP00000031702	LOC102219022	ENSXMAP00000031702	ENSXMAP00000040583	Uncharacterized protein.	RAB11B, member RAS oncogene family, a.	0.436
ENSXMAP00000031702	LOC102221052	ENSXMAP00000031702	ENSXMAP00000029837	Uncharacterized protein.	CHM Rab escort protein.	0.546
ENSXMAP00000031702	LOC102221458	ENSXMAP00000031702	ENSXMAP00000003243	Uncharacterized protein.	RAB25, member RAS oncogene family a.	0.442
ENSXMAP00000031702	LOC102221887	ENSXMAP00000031702	ENSXMAP00000016266	Uncharacterized protein.	RAB36, member RAS oncogene family.	0.446
ENSXMAP00000031702	LOC102223209	ENSXMAP00000031702	ENSXMAP00000016672	Uncharacterized protein.	RAB6B, member RAS oncogene family a.	0.432
ENSXMAP00000031702	LOC102229334	ENSXMAP00000031702	ENSXMAP00000004579	Uncharacterized protein.	RAB, member of RAS oncogene family-like 2.	0.437
ENSXMAP00000031702	LOC102231206	ENSXMAP00000031702	ENSXMAP00000021136	Uncharacterized protein.	RAB34, member RAS oncogene family b.	0.444
ENSXMAP00000031702	LOC102236307	ENSXMAP00000031702	ENSXMAP00000040461	Uncharacterized protein.	Uncharacterized protein.	0.427
ENSXMAP00000031702	M4A0I8_XIPMA	ENSXMAP00000031702	ENSXMAP00000007982	Uncharacterized protein.	Uncharacterized protein.	0.411
ENSXMAP00000031702	RAB41	ENSXMAP00000031702	ENSXMAP00000038379	Uncharacterized protein.	RAB41, member RAS oncogene family.	0.433
ENSXMAP00000031702	dnajc27	ENSXMAP00000031702	ENSXMAP00000003421	Uncharacterized protein.	DnaJ (Hsp40) homolog, subfamily C, member 27.	0.424
ENSXMAP00000031702	ptar1	ENSXMAP00000031702	ENSXMAP00000018220	Uncharacterized protein.	Protein prenyltransferase alpha subunit repeat containing 1.	0.517
ENSXMAP00000031702	rab11a	ENSXMAP00000031702	ENSXMAP00000029405	Uncharacterized protein.	RAB11a, member RAS oncogene family.	0.436
ENSXMAP00000031702	rab25	ENSXMAP00000031702	ENSXMAP00000038712	Uncharacterized protein.	RAB25, member RAS oncogene family b.	0.439
ENSXMAP00000031702	rab28	ENSXMAP00000031702	ENSXMAP00000030416	Uncharacterized protein.	Uncharacterized protein.	0.402
ENSXMAP00000031702	rab2a	ENSXMAP00000031702	ENSXMAP00000026668	Uncharacterized protein.	RAB2A, member RAS oncogene family.	0.413
ENSXMAP00000031702	rab34	ENSXMAP00000031702	ENSXMAP00000026562	Uncharacterized protein.	RAB34, member RAS oncogene family a.	0.432
ENSXMAP00000031702	rab6a	ENSXMAP00000031702	ENSXMAP00000011938	Uncharacterized protein.	RAB6A, member RAS oncogene family.	0.430