19 items (Xiphophorus maculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102224942	Hairy-related 8.2. (199 aa)
	LOC102223598	Uncharacterized protein. (685 aa)
	LOC102221827	Uncharacterized protein. (358 aa)
	LOC102228719	Mothers against decapentaplegic homolog. (503 aa)
	LOC102216611	Uncharacterized protein. (563 aa)
	ucma	Upper zone of growth plate and cartilage matrix associated a. (224 aa)
	LOC102223458	Uncharacterized protein. (348 aa)
	LOC102229135	Upper zone of growth plate and cartilage matrix associated b. (141 aa)
	ZNF521	Zinc finger protein 521. (1400 aa)
	SMAD4	Mothers against decapentaplegic homolog. (512 aa)
	smad1	Mothers against decapentaplegic homolog. (496 aa)
	LOC102223193	RNA binding motif protein 4.3. (340 aa)
	ar	Androgen receptor. (754 aa)
	znf423	Si:ch211-216l23.1. (1438 aa)
	cbfb	Core-binding factor subunit beta. (188 aa)
	hes1	Hairy-related 6. (277 aa)
	hes4	Hairy-related 9. (287 aa)
	LOC102222860	Uncharacterized protein. (346 aa)
	LOC102236639	Runt-related transcription factor. (464 aa)

Your Current Organism:

Xiphophorus maculatus

NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102216611	LOC102236639	ENSXMAP00000008412	ENSXMAP00000041045	Uncharacterized protein.	Runt-related transcription factor.	0.587
LOC102221827	hes1	ENSXMAP00000004445	ENSXMAP00000038996	Uncharacterized protein.	Hairy-related 6.	0.902
LOC102221827	hes4	ENSXMAP00000004445	ENSXMAP00000039649	Uncharacterized protein.	Hairy-related 9.	0.903
LOC102222860	LOC102236639	ENSXMAP00000039920	ENSXMAP00000041045	Uncharacterized protein.	Runt-related transcription factor.	0.426
LOC102223193	LOC102236639	ENSXMAP00000033579	ENSXMAP00000041045	RNA binding motif protein 4.3.	Runt-related transcription factor.	0.426
LOC102223458	LOC102236639	ENSXMAP00000011719	ENSXMAP00000041045	Uncharacterized protein.	Runt-related transcription factor.	0.426
LOC102223598	LOC102236639	ENSXMAP00000002905	ENSXMAP00000041045	Uncharacterized protein.	Runt-related transcription factor.	0.534
LOC102223598	ar	ENSXMAP00000002905	ENSXMAP00000035568	Uncharacterized protein.	Androgen receptor.	0.902
LOC102228719	LOC102236639	ENSXMAP00000005074	ENSXMAP00000041045	Mothers against decapentaplegic homolog.	Runt-related transcription factor.	0.536
LOC102228719	SMAD4	ENSXMAP00000005074	ENSXMAP00000031130	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.900
LOC102228719	cbfb	ENSXMAP00000005074	ENSXMAP00000036077	Mothers against decapentaplegic homolog.	Core-binding factor subunit beta.	0.526
LOC102228719	smad1	ENSXMAP00000005074	ENSXMAP00000032082	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.818
LOC102236639	LOC102216611	ENSXMAP00000041045	ENSXMAP00000008412	Runt-related transcription factor.	Uncharacterized protein.	0.587
LOC102236639	LOC102222860	ENSXMAP00000041045	ENSXMAP00000039920	Runt-related transcription factor.	Uncharacterized protein.	0.426
LOC102236639	LOC102223193	ENSXMAP00000041045	ENSXMAP00000033579	Runt-related transcription factor.	RNA binding motif protein 4.3.	0.426
LOC102236639	LOC102223458	ENSXMAP00000041045	ENSXMAP00000011719	Runt-related transcription factor.	Uncharacterized protein.	0.426
LOC102236639	LOC102223598	ENSXMAP00000041045	ENSXMAP00000002905	Runt-related transcription factor.	Uncharacterized protein.	0.534
LOC102236639	LOC102228719	ENSXMAP00000041045	ENSXMAP00000005074	Runt-related transcription factor.	Mothers against decapentaplegic homolog.	0.536
LOC102236639	SMAD4	ENSXMAP00000041045	ENSXMAP00000031130	Runt-related transcription factor.	Mothers against decapentaplegic homolog.	0.536
LOC102236639	ar	ENSXMAP00000041045	ENSXMAP00000035568	Runt-related transcription factor.	Androgen receptor.	0.534