128 items (Xiphophorus maculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rps27a	Ribosomal protein S27a. (156 aa)
	LOC102229533	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family. (106 aa)
	rpl14	Ribosomal protein L14. (136 aa)
	Rps25	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (96 aa)
	LOC102235710	Uncharacterized protein. (1084 aa)
	LOC102236397	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (445 aa)
	rps7	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (194 aa)
	UPF1	UPF1 RNA helicase and ATPase. (1098 aa)
	rpl18a	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (176 aa)
	RPL5	Ribosomal protein L5b. (281 aa)
	LOC102231060	NAD(P)-bd_dom domain-containing protein. (214 aa)
	rpl13	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (211 aa)
	LOC102224586	40S ribosomal protein S27. (86 aa)
	LOC102234596	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (634 aa)
	ppp2r1b	Protein phosphatase 2, regulatory subunit A, beta b. (589 aa)
	LOC102218016	Ribosomal protein L5. (298 aa)
	LOC102235575	Ribosomal protein L22. (130 aa)
	rpl10	Ribosomal protein L10. (179 aa)
	rnps1	RNA binding protein S1, serine-rich domain. (279 aa)
	rps15a	Ribosomal protein S15a; Belongs to the universal ribosomal protein uS8 family. (164 aa)
	etf1	Eukaryotic translation termination factor 1b. (443 aa)
	rpl37	Ribosomal protein L37; Binds to the 23S rRNA. (97 aa)
	RPL27A	Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family. (148 aa)
	rpl28	Ribosomal protein L28. (137 aa)
	rps6	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (256 aa)
	rps14	Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
	smg7	SMG7 nonsense mediated mRNA decay factor. (1135 aa)
	rpl23	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family. (140 aa)
	rpl36	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (141 aa)
	rps3a	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (266 aa)
	LOC102236045	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (197 aa)
	rpl7l1	Ribosomal protein L7-like 1. (247 aa)
	smg8	SMG8 nonsense mediated mRNA decay factor. (917 aa)
	kxd1	KxDL motif containing 1. (184 aa)
	rps11	Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (161 aa)
	ncbp2	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (164 aa)
	smg1	SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family. (3624 aa)
	LOC102219960	Ribosomal protein L26. (190 aa)
	smg6	SMG6 nonsense mediated mRNA decay factor. (1618 aa)
	rpl7	Ribosomal protein L7. (245 aa)
	LOC102231214	Ribosomal protein, large P2; Belongs to the eukaryotic ribosomal protein P1/P2 family. (116 aa)
	rpl22l1	Ribosomal protein L22-like 1. (129 aa)
	rps9	Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (194 aa)
	rps13	Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	rpl31	Ribosomal protein L31. (124 aa)
	rsad1	Radical S-adenosyl methionine domain-containing protein; May be a heme chaperone, appears to bind heme. Homologous bacterial proteins do not have oxygen-independent coproporphyrinogen- III oxidase activity. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L- methionine; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (439 aa)
	arl6ip1	ADP-ribosylation factor-like 6 interacting protein 1. (203 aa)
	M4AFX0_XIPMA	Mechanistic target of rapamycin kinase; Belongs to the PI3/PI4-kinase family. (777 aa)
	LOC102218128	UPF3A regulator of nonsense mediated mRNA decay. (464 aa)
	rbm8a	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (175 aa)
	smg5	SMG5 nonsense mediated mRNA decay factor. (1113 aa)
	upf3b	UPF3B regulator of nonsense mediated mRNA decay. (453 aa)
	Rpl39	Ribosomal protein L39. (58 aa)
	rps15	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (145 aa)
	M4AHM8_XIPMA	Ribosomal protein S28. (53 aa)
	casc3	Casc3 exon junction complex subunit. (767 aa)
	rpl3	Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (403 aa)
	rpl35a	Ribosomal protein L35a. (110 aa)
	eif4a3	Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. (406 aa)
	rnpepl1	Arginyl aminopeptidase like 1. (714 aa)
	rps5	Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (203 aa)
	rps4x	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (263 aa)
	rps2	Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (279 aa)
	rps8	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (204 aa)
	RPS19	Ribosomal protein S19. (154 aa)
	rplp1	Ribosomal protein, large, P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (113 aa)
	LOC102232912	40S ribosomal protein S27. (191 aa)
	rpl11	Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (178 aa)
	rpl15	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
	UPF2	UPF2 regulator of nonsense mediated mRNA decay. (1307 aa)
	rpl8	Ribosomal protein L8. (257 aa)
	NCBP1	Nuclear cap binding protein subunit 1. (796 aa)
	rplp0	Ribosomal protein, large, P0. (252 aa)
	pabpc4	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (626 aa)
	pnrc2	Proline-rich nuclear receptor coactivator 2. (155 aa)
	M4AZB2_XIPMA	Uncharacterized protein. (56 aa)
	LOC102220954	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (455 aa)
	rps26	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (126 aa)
	ENSXMAP00000020989	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family. (87 aa)
	pih1d3	PIH1 domain containing 3. (187 aa)
	rpl21	Ribosomal protein L21. (182 aa)
	LOC102220839	G1 to S phase transition 1, like. (578 aa)
	LOC102235702	Ribosomal protein S17. (174 aa)
	gspt1	G1 to S phase transition 1. (586 aa)
	rpl24	Ribosomal protein L24. (157 aa)
	rpl37a	Ribosomal protein L37a. (92 aa)
	dcp1a	Decapping mRNA 1A. (491 aa)
	rpl17	Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (220 aa)
	rpl23a	Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. (176 aa)
	LOC102225941	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (446 aa)
	rpl30	Ribosomal protein L30. (121 aa)
	rps10	Ribosomal protein S10. (166 aa)
	rps3	Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (245 aa)
	rps18	Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (152 aa)
	rpsa	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (310 aa)
	rpl13a	Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family. (205 aa)
	rsrc1	Arginine and serine rich coiled-coil 1. (320 aa)
	rpl27	Ribosomal protein L27. (143 aa)
	RPL19	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (223 aa)
	RPS29	Ribosomal protein S29. (72 aa)
	LOC102225777	Ribosomal protein S19. (146 aa)
	LOC102225077	40S ribosomal protein S27. (197 aa)
	aknad1	Uncharacterized protein. (1232 aa)
	rpl6	Ribosomal protein L6. (259 aa)
	rpl9	Ribosomal protein L9. (193 aa)
	LOC102233713	Mago homolog, exon junction complex subunit. (149 aa)
	rpl12	Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (165 aa)
	rps21	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (83 aa)
	RPS20	Ribosomal protein S20. (119 aa)
	rpl4	Ribosomal protein L4. (368 aa)
	ENSXMAP00000033174	Uncharacterized protein. (117 aa)
	rpl35	Ribosomal protein L35. (124 aa)
	pabpc1	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (635 aa)
	LOC102226026	Ribosomal protein L22. (172 aa)
	RPS17	Ribosomal protein S17. (134 aa)
	RPL3L	Ribosomal protein L3 like; Belongs to the universal ribosomal protein uL3 family. (257 aa)
	Mrnip	Uncharacterized protein. (65 aa)
	rps24	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (201 aa)
	RPL7A	Ribosomal protein L7a. (266 aa)
	rps16	Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (146 aa)
	smg9	SMG9 nonsense mediated mRNA decay factor. (507 aa)
	rpl38	Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (124 aa)
	rpl29	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (64 aa)
	rpl32	Ribosomal protein L32. (135 aa)
	rps23	Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
	LOC102230133	Poly(A) binding protein, cytoplasmic 1-like. (651 aa)
	rps12	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (154 aa)
	rpl18	Ribosomal protein L18. (188 aa)

Your Current Organism:

Xiphophorus maculatus

NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSXMAP00000020989	LOC102218016	ENSXMAP00000020989	ENSXMAP00000004109	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	Ribosomal protein L5.	0.980
ENSXMAP00000020989	LOC102219960	ENSXMAP00000020989	ENSXMAP00000010307	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	Ribosomal protein L26.	0.993
ENSXMAP00000020989	LOC102220839	ENSXMAP00000020989	ENSXMAP00000022052	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	G1 to S phase transition 1, like.	0.571
ENSXMAP00000020989	LOC102224586	ENSXMAP00000020989	ENSXMAP00000003396	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	40S ribosomal protein S27.	0.907
ENSXMAP00000020989	LOC102225077	ENSXMAP00000020989	ENSXMAP00000030543	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	40S ribosomal protein S27.	0.949
ENSXMAP00000020989	LOC102225777	ENSXMAP00000020989	ENSXMAP00000030182	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	Ribosomal protein S19.	0.961
ENSXMAP00000020989	LOC102226026	ENSXMAP00000020989	ENSXMAP00000033844	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	Ribosomal protein L22.	0.924
ENSXMAP00000020989	LOC102229533	ENSXMAP00000020989	ENSXMAP00000000303	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family.	0.987
ENSXMAP00000020989	LOC102230133	ENSXMAP00000020989	ENSXMAP00000039772	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	Poly(A) binding protein, cytoplasmic 1-like.	0.402
ENSXMAP00000020989	LOC102231060	ENSXMAP00000020989	ENSXMAP00000003161	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	NAD(P)-bd_dom domain-containing protein.	0.909
ENSXMAP00000020989	LOC102231214	ENSXMAP00000020989	ENSXMAP00000011047	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	Ribosomal protein, large P2; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.992
ENSXMAP00000020989	LOC102232912	ENSXMAP00000020989	ENSXMAP00000016111	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	40S ribosomal protein S27.	0.949
ENSXMAP00000020989	LOC102234596	ENSXMAP00000020989	ENSXMAP00000003775	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.402
ENSXMAP00000020989	LOC102235575	ENSXMAP00000020989	ENSXMAP00000004595	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	Ribosomal protein L22.	0.924
ENSXMAP00000020989	LOC102235702	ENSXMAP00000020989	ENSXMAP00000022395	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	Ribosomal protein S17.	0.962
ENSXMAP00000020989	LOC102235710	ENSXMAP00000020989	ENSXMAP00000001707	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	Uncharacterized protein.	0.414
ENSXMAP00000020989	LOC102236045	ENSXMAP00000020989	ENSXMAP00000008491	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.977
ENSXMAP00000020989	M4AHM8_XIPMA	ENSXMAP00000020989	ENSXMAP00000013972	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	Ribosomal protein S28.	0.984
ENSXMAP00000020989	M4AZB2_XIPMA	ENSXMAP00000020989	ENSXMAP00000019807	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	Uncharacterized protein.	0.960
ENSXMAP00000020989	Mrnip	ENSXMAP00000020989	ENSXMAP00000034636	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	Uncharacterized protein.	0.959