22 items (Xiphophorus maculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102220615	Forkhead box G1d. (344 aa)
	btg1	B-cell translocation gene 1, anti-proliferative. (180 aa)
	LOC102229392	Forkhead box O6 a. (719 aa)
	foxo4	Forkhead box O4. (624 aa)
	LOC102228719	Mothers against decapentaplegic homolog. (503 aa)
	LOC102224322	Mothers against decapentaplegic homolog. (467 aa)
	smad3	Mothers against decapentaplegic homolog. (425 aa)
	foxo3	Forkhead protein FoxO5. (664 aa)
	CCNG2	Cyclin G2; Belongs to the cyclin family. (331 aa)
	smad2	Mothers against decapentaplegic homolog. (474 aa)
	LOC102225323	Mothers against decapentaplegic homolog. (563 aa)
	LOC102234578	Cyclin G2; Belongs to the cyclin family. (330 aa)
	LOC102230497	Forkhead box O6 b. (743 aa)
	foxg1	Forkhead box G1a. (343 aa)
	LOC102220056	Fork-head domain-containing protein. (392 aa)
	LOC102235052	Growth differentiation factor 11. (389 aa)
	SMAD4	Mothers against decapentaplegic homolog. (512 aa)
	ENSXMAP00000033320	TGFb_propeptide domain-containing protein. (144 aa)
	LOC102237658	Myostatin a. (366 aa)
	foxo1	Forkhead box O1 a. (663 aa)
	SMAD3	Mothers against decapentaplegic homolog. (425 aa)
	LOC102225439	Fork-head domain-containing protein. (602 aa)

Your Current Organism:

Xiphophorus maculatus

NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCNG2	LOC102234578	ENSXMAP00000003207	ENSXMAP00000021115	Cyclin G2; Belongs to the cyclin family.	Cyclin G2; Belongs to the cyclin family.	0.902
LOC102220056	LOC102224322	ENSXMAP00000024744	ENSXMAP00000004510	Fork-head domain-containing protein.	Mothers against decapentaplegic homolog.	0.408
LOC102220056	LOC102225323	ENSXMAP00000024744	ENSXMAP00000021000	Fork-head domain-containing protein.	Mothers against decapentaplegic homolog.	0.466
LOC102220056	LOC102225439	ENSXMAP00000024744	ENSXMAP00000041664	Fork-head domain-containing protein.	Fork-head domain-containing protein.	0.444
LOC102220056	LOC102228719	ENSXMAP00000024744	ENSXMAP00000005074	Fork-head domain-containing protein.	Mothers against decapentaplegic homolog.	0.466
LOC102220056	SMAD3	ENSXMAP00000024744	ENSXMAP00000041069	Fork-head domain-containing protein.	Mothers against decapentaplegic homolog.	0.408
LOC102220056	SMAD4	ENSXMAP00000024744	ENSXMAP00000031130	Fork-head domain-containing protein.	Mothers against decapentaplegic homolog.	0.466
LOC102220056	foxo1	ENSXMAP00000024744	ENSXMAP00000034447	Fork-head domain-containing protein.	Forkhead box O1 a.	0.444
LOC102220056	foxo3	ENSXMAP00000024744	ENSXMAP00000003275	Fork-head domain-containing protein.	Forkhead protein FoxO5.	0.444
LOC102220056	foxo4	ENSXMAP00000024744	ENSXMAP00000013151	Fork-head domain-containing protein.	Forkhead box O4.	0.444
LOC102220056	smad2	ENSXMAP00000024744	ENSXMAP00000020548	Fork-head domain-containing protein.	Mothers against decapentaplegic homolog.	0.408
LOC102220056	smad3	ENSXMAP00000024744	ENSXMAP00000003571	Fork-head domain-containing protein.	Mothers against decapentaplegic homolog.	0.408
LOC102220615	LOC102224322	ENSXMAP00000020049	ENSXMAP00000004510	Forkhead box G1d.	Mothers against decapentaplegic homolog.	0.408
LOC102220615	LOC102225323	ENSXMAP00000020049	ENSXMAP00000021000	Forkhead box G1d.	Mothers against decapentaplegic homolog.	0.466
LOC102220615	LOC102225439	ENSXMAP00000020049	ENSXMAP00000041664	Forkhead box G1d.	Fork-head domain-containing protein.	0.444
LOC102220615	LOC102228719	ENSXMAP00000020049	ENSXMAP00000005074	Forkhead box G1d.	Mothers against decapentaplegic homolog.	0.466
LOC102220615	SMAD3	ENSXMAP00000020049	ENSXMAP00000041069	Forkhead box G1d.	Mothers against decapentaplegic homolog.	0.408
LOC102220615	SMAD4	ENSXMAP00000020049	ENSXMAP00000031130	Forkhead box G1d.	Mothers against decapentaplegic homolog.	0.466
LOC102220615	foxo1	ENSXMAP00000020049	ENSXMAP00000034447	Forkhead box G1d.	Forkhead box O1 a.	0.444
LOC102220615	foxo3	ENSXMAP00000020049	ENSXMAP00000003275	Forkhead box G1d.	Forkhead protein FoxO5.	0.444