STRINGSTRING
bcl2 bcl2 vhl vhl mlh1 mlh1 atm atm tert tert ercc1 ercc1 msh2 msh2 adar adar brca1 brca1 myb myb ada ada
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
bcl2BCL2 apoptosis regulator b. (229 aa)
vhlVon Hippel-Lindau tumor suppressor. (164 aa)
mlh1MutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli). (754 aa)
atmATM serine/threonine kinase; Belongs to the PI3/PI4-kinase family. (2875 aa)
tertTelomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. (1097 aa)
ercc1Excision repair cross-complementation group 1. (350 aa)
msh2DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (937 aa)
adarAdenosine deaminase RNA specific. (1359 aa)
brca1Uncharacterized protein. (1370 aa)
mybV-myb avian myeloblastosis viral oncogene homolog. (596 aa)
adaAdenosine deaminase. (398 aa)
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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